RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 P04436 131 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 TPOP07202 933 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 ABHD2P08910 425 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 PTGER1P34995 402 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 MPEG1Q2M385 716 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 OR52E8Q6IFG1 317 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 SLC22A16Q86VW1 577 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 NUBPLQ8TB37 319 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 FAM173AQ9BQD7 235 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 SEMA4BQ9NPR2 832 aaPredicted RBP17.57■□□□□ 0.4
CLN6-221ENST00000637494 SACM1LQ9NTJ5 587 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 NMRK1Q9NWW6 199 aa17.57■□□□□ 0.4
CLN6-221ENST00000637494 DIDO1Q9BTC0 2240 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 A0A1B0GTH9 108 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 E9PLN8 166 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 GUCY1B2O75343 617 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 CNR1P21554 472 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 PIK3R1P27986 724 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 HTR1EP28566 365 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 PPIAP62937 165 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 TBL3Q12788 808 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 ASPHQ12797 758 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 ZNF267Q14586 743 aaPredicted RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 ZNF750Q32MQ0 723 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 GGTA1PQ4G0N0 100 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 PIGGQ5H8A4 983 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 NDUFAF5Q5TEU4 345 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 MRM1Q6IN84 353 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 ARHGAP11AQ6P4F7 1023 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 RNF111Q6ZNA4 994 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 FAM47EQ6ZV65 393 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 LCA5Q86VQ0 697 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 DND1Q8IYX4 353 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 SLC15A4Q8N697 577 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 OR2M7Q8NG81 312 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 FAM57AQ8TBR7 257 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 PHF10Q8WUB8 498 aaKnown RBP17.56■□□□□ 0.4
CLN6-221ENST00000637494 RIT1Q92963 219 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 VKORC1Q9BQB6 163 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 ADAM29Q9UKF5 820 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 SNX6Q9UNH7 406 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 ASB4Q9Y574 426 aa17.56■□□□□ 0.4
CLN6-221ENST00000637494 A0A1W2PR48 441 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 GLOD5A6NK44 160 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 TMPRSS11DO60235 418 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 PRKRAO75569 313 aaKnown RBP17.55■□□□□ 0.4
CLN6-221ENST00000637494 GALNSP34059 522 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 HERVK_113P63132 956 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 ERVK-8P63133 956 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 ADORA2A-AS1P86434 159 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 SPRED3Q2MJR0 410 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 CMPK2Q5EBM0 449 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 CCNYL2Q5T2Q4 361 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 DOLPP1Q86YN1 238 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 MYRIPQ8NFW9 859 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 OR4F6Q8NGB9 312 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 NSUN5Q96P11 429 aaKnown RBP17.55■□□□□ 0.4
CLN6-221ENST00000637494 ERVK-6Q9BXR3 956 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 ZNF717Q9BY31 904 aaPredicted RBP17.55■□□□□ 0.4
CLN6-221ENST00000637494 DEFB127Q9H1M4 99 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 COQ3Q9NZJ6 369 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 ERVK-19Q9WJR5 959 aa17.55■□□□□ 0.4
CLN6-221ENST00000637494 OR6C76A6NM76 312 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 A8MT66 165 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 PDE9AO76083 593 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 CLDN14O95500 239 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 AIFM1O95831 613 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 GBAP04062 536 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 IGKV3-11P04433 115 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 RPS17P08708 135 aaKnown RBP17.54■□□□□ 0.4
CLN6-221ENST00000637494 SLC35E2P0CK97 266 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 TRAF3Q13114 568 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 ZNF630Q2M218 657 aaPredicted RBP17.54■□□□□ 0.4
CLN6-221ENST00000637494 SGO1Q5FBB7 561 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 TMEM211Q6ICI0 200 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 ADGRD1Q6QNK2 874 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 TIFABQ6ZNK6 161 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 CD163Q86VB7 1156 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 C9orf40Q8IXQ3 194 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 OR4K14Q8NGD5 310 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 SELENOMQ8WWX9 145 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 PHF12Q96QT6 1004 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 GAL3ST4Q96RP7 486 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 TTTY12Q9BZ98 90 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 ZBTB26Q9HCK0 441 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 DEPPQ9NTK1 212 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 SLC12A4Q9UP95 1085 aa17.54■□□□□ 0.4
CLN6-221ENST00000637494 FAM166BA8MTA8 275 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 G3V3Y1 287 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 RIPK2O43353 540 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 KLK1P06870 262 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 RHOXF2BP0C7M4 288 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 COX6B1P14854 86 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 SERPINB3P29508 390 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
CLN6-221ENST00000637494 MAPK12P53778 367 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 HLA-DQA1Q5Y7H0 255 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 SLC22A10Q63ZE4 541 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 TAGAPQ8N103 731 aa17.53■□□□□ 0.4
CLN6-221ENST00000637494 OR52N2Q8NGI0 321 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms