RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
CLN8-212ENST00000637083 PPP2R2DQ66LE6 453 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 FRMPD2BQ6IN97 320 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 ANKRD54Q6NXT1 300 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 PLD3Q8IV08 490 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 SLC15A4Q8N697 577 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 OR2L5Q8NG80 312 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 NR4A3Q92570 626 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 GGHQ92820 318 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 UBE2FQ969M7 185 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 SH3YL1Q96HL8 342 aaPredicted RBP11.49□□□□□ -0.57
CLN8-212ENST00000637083 UCK2Q9BZX2 261 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 KIR3DX1Q9H7L2 352 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
CLN8-212ENST00000637083 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
CLN8-212ENST00000637083 NCKAP1Q9Y2A7 1128 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 DGKBQ9Y6T7 804 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 SZT2Q5T011 3432 aa11.49□□□□□ -0.57
CLN8-212ENST00000637083 PRR19A6NJB7 356 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ZAR1LA6NP61 321 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 NADKO95544 446 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 H1F0P07305 194 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 OSMP13725 252 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 GABRB1P18505 474 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 UGT2B10P36537 528 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 CLK1P49759 484 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 NCBP2P52298 156 aaKnown RBP eCLIP11.48□□□□□ -0.573e-7■□□□□ 10.6
CLN8-212ENST00000637083 UGT2B15P54855 530 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 STXBP1P61764 594 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLN8-212ENST00000637083 PUM1Q14671 1186 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLN8-212ENST00000637083 RPE65Q16518 533 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 CYP27C1Q4G0S4 372 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 C2orf27AQ580R0 203 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 SYCE2Q6PIF2 218 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 PTCHD4Q6ZW05 846 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 FAM46DQ8NEK8 389 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 OR56A1Q8NGH5 318 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 APOBEC4Q8WW27 367 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 KLK6Q92876 244 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 RAB8BQ92930 207 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 LGALS12Q96DT0 336 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 SCARF2Q96GP6 870 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 COX4I2Q96KJ9 171 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 AMDHD1Q96NU7 426 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 BTBD2Q9BX70 525 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ABCG4Q9H172 646 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 OR51I1Q9H343 314 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 GLIPR2Q9H4G4 154 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 XKR8Q9H6D3 395 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ZCCHC3Q9NUD5 404 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 ZNF226Q9NYT6 803 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 SLC9A8Q9Y2E8 581 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 hCG_2014768A0A024R1R8 64 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 PRR23AA6NEV1 266 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 EFCAB9A8MZ26 197 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ANHXE9PGG2 379 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 MAN2B1O00754 1011 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ERI3O43414 337 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 PRICKLE3O43900 615 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 MAN1A2O60476 641 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 GASTP01350 101 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 FUCA1P04066 466 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 LAMP2P13473 410 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 HIST1H1TP22492 207 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 IGFALSP35858 605 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 GSSP48637 474 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 KIAA1024LP59773 190 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 RPS26P62854 115 aaKnown RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 SLAMF1Q13291 335 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ILKQ13418 452 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 LRRC32Q14392 662 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TIGD6Q17RP2 521 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 RGS21Q2M5E4 152 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 RPS26P11Q5JNZ5 115 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 FAM180BQ6P0A1 224 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 ABHD17CQ6PCB6 329 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 Q6ZPB1 254 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 SZRD1Q7Z422 152 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
CLN8-212ENST00000637083 MFSD9Q8NBP5 474 aa11.48□□□□□ -0.57
CLN8-212ENST00000637083 OR2L3Q8NG85 312 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms