RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 J3KTA2 159 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 BCAS1O75363 584 aaPredicted RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 EGFP01133 1207 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 KCNJ5P48544 419 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 EMP3P54852 163 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 CDC42P60953 191 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PPP2CBP62714 309 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PPP2CAP67775 309 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 HTR4Q13639 388 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ZNF829Q3KNS6 432 aaPredicted RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 CYP27C1Q4G0S4 372 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 RPS26P11Q5JNZ5 115 aaPredicted RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 ZNF425Q6IV72 752 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 SLC16A12Q6ZSM3 486 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 AMER3Q8N944 861 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ACOT4Q8N9L9 421 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 OR56A1Q8NGH5 318 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 APOBEC4Q8WW27 367 aaKnown RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 RAB8BQ92930 207 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 AICDAQ9GZX7 198 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 KLHL31Q9H511 634 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 NECTIN3Q9NQS3 549 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PRDM7Q9NQW5 492 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ZCCHC3Q9NUD5 404 aaKnown RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 AASSQ9UDR5 926 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 SEC14L3Q9UDX4 400 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PNMA8BQ9ULN7 279 aaPredicted RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 ASB4Q9Y574 426 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PCDH17O14917 1159 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 CLPXO76031 633 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 FADS2O95864 444 aaKnown RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 ADAP00813 363 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 CHRM5P08912 532 aaPredicted RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 NR2F1P10589 423 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ACVR2AP27037 513 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PSMB9P28065 219 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 MAP2K4P45985 399 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ENTPD1P49961 510 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 RPS15AP62244 130 aaKnown RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 HYAL2Q12891 473 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 BNIP3Q12983 259 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 SMN1Q16637 294 aaKnown RBP17.53■□□□□ 0.4
CLN8-211ENST00000636934 ENPP7Q6UWV6 458 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 CCDC81Q6ZN84 652 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 AHSA2Q719I0 299 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 TRIM69Q86WT6 500 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 YIPF6Q96EC8 236 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 CSF3RQ99062 836 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 COPS4Q9BT78 406 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 OR51I1Q9H343 314 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 TBC1D23Q9NUY8 699 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 RLIMQ9NVW2 624 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 TRPC4Q9UBN4 977 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PSORS1C1Q9UIG5 152 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 PCOLCE2Q9UKZ9 415 aa17.53■□□□□ 0.4
CLN8-211ENST00000636934 ANHXE9PGG2 379 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 FAAHO00519 579 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 TNFRSF10CO14798 259 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 B4GALT2O60909 372 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 VIPP01282 170 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 PEBP1P30086 187 aaKnown RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 CD6P30203 668 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 CRISP3P54108 245 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 RGS1Q08116 209 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 PUM1Q14671 1186 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLN8-211ENST00000636934 GANABQ14697 944 aaKnown RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 UBE2UQ5VVX9 321 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 SZRD1Q7Z422 152 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 P2RY8Q86VZ1 359 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 FBXL6Q8N531 539 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 AQP11Q8NBQ7 271 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 OR9Q2Q8NGE9 314 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 OR8K5Q8NH50 307 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 UTP15Q8TED0 518 aaKnown RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 DNASE1L2Q92874 299 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 COL21A1Q96P44 957 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 SIGLEC11Q96RL6 698 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 C8orf33Q9H7E9 229 aaPredicted RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 BCL2L10Q9HD36 194 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 SPHK1Q9NYA1 384 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 SCHIP1Q9P0W5 487 aaPredicted RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 DUSP12Q9UNI6 340 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 MGAT4BQ9UQ53 548 aa17.52■□□□□ 0.4
CLN8-211ENST00000636934 GPC6Q9Y625 555 aaPredicted RBP17.52■□□□□ 0.4
CLN8-211ENST00000636934 DOCK9Q9BZ29 2069 aa17.52■□□□□ 0.39
CLN8-211ENST00000636934 CLCA1A8K7I4 914 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 TMX2-CTNND1H3BSU7 103 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 ZW10O43264 779 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 OR12D1P0DN82 309 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 CSNK2A2P19784 350 aaPredicted RBP17.51■□□□□ 0.39
CLN8-211ENST00000636934 IDH2P48735 452 aaKnown RBP17.51■□□□□ 0.39
CLN8-211ENST00000636934 MASP1P48740 699 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 CTF1Q16619 201 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 TJAP1Q5JTD0 557 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 PRAMEF8Q5VWM4 474 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 PRAMEF7Q5VXH5 474 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 DNAJC22Q8N4W6 341 aa17.51■□□□□ 0.39
CLN8-211ENST00000636934 GPR32P1Q8NGA4 272 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms