RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FBXL4Q9UKA2 621 aa14.99□□□□□ -0.01
CLN6-216ENST00000636876 UTS2RQ9UKP6 389 aa14.99□□□□□ -0.01
CLN6-216ENST00000636876 PCSK5Q92824 1860 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 IGHV1-45A0A0A0MS14 117 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 A0A1W2PS29 197 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 GMNCA6NCL1 334 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 E9PBE3 544 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 UBDO15205 165 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 KLHL41O60662 606 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 TBX19O60806 448 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 ERAL1O75616 437 aaKnown RBP14.98□□□□□ -0.01
CLN6-216ENST00000636876 COX6A1P12074 109 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 PCSK2P16519 638 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 PRPS1L1P21108 318 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 HPCAL1P37235 193 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 XKP51811 444 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 CLDN8P56748 225 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 C21orf58P58505 322 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 PDE7AQ13946 482 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 PCOLCEQ15113 449 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 TICAM1Q8IUC6 712 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 RIMKLAQ8IXN7 391 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 MTERF3Q96E29 417 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 WDR77Q9BQA1 342 aaPredicted RBP14.98□□□□□ -0.01
CLN6-216ENST00000636876 TMEM120AQ9BXJ8 343 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 BRINP2Q9C0B6 783 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 ADAP2Q9NPF8 381 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 TAS2R7Q9NYW3 318 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 ATP6V1HQ9UI12 483 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 POLHQ9Y253 713 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 GPR45Q9Y5Y3 372 aa14.98□□□□□ -0.01
CLN6-216ENST00000636876 IGHV3-20A0A0C4DH32 117 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 ANKRD28O15084 1053 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 SCAMP2O15127 329 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 SEC24DO94855 1032 aaPredicted RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 HPP00738 406 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 IFNA16P05015 189 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 SLC35E2P0CK97 266 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 IDO1P14902 403 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PORP16435 677 aaPredicted RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 DRD4P21917 467 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 RPL3P39023 403 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 STT3AP46977 705 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PLIN5Q00G26 463 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 ELAVL1Q15717 326 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 GSTA3Q16772 222 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PRSS53Q2L4Q9 553 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 ZNF750Q32MQ0 723 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PAPD4Q6PIY7 484 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 NDUFAF7Q7L592 441 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 R3HCC1LQ7Z5L2 792 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 SAMD14Q8IZD0 417 aaPredicted RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 ST13P4Q8IZP2 240 aaPredicted RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 KRTCAP2Q8N6L1 136 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 SNRNP27Q8WVK2 155 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 EXOSC8Q96B26 276 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 PPCDCQ96CD2 204 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 CNRIP1Q96F85 164 aaPredicted RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 MARK4Q96L34 752 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 ZNF681Q96N22 645 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 RILPQ96NA2 401 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 DGAT2Q96PD7 388 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PELOQ9BRX2 385 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 DPY30Q9C005 99 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 NSRP1Q9H0G5 558 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 SLC35C2Q9NQQ7 365 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 PNO1Q9NRX1 252 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 GIMAP4Q9NUV9 329 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 KLHL14Q9P2G3 628 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 G3BP2Q9UN86 482 aaKnown RBP14.97□□□□□ -0.01
CLN6-216ENST00000636876 MAPRE3Q9UPY8 281 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 MAN2B2Q9Y2E5 1009 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 ZNF780BQ9Y6R6 833 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 LOC400499M0QZD8 3231 aa14.97□□□□□ -0.01
CLN6-216ENST00000636876 NSG1A0A0A6YYJ2 146 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 GABRR3A8MPY1 467 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 A8MUA0 341 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 OR10H2O60403 315 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 CPMP14384 443 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 DDX5P17844 614 aaKnown RBP14.96□□□□□ -0.01
CLN6-216ENST00000636876 CSNK2A2P19784 350 aaPredicted RBP14.96□□□□□ -0.01
CLN6-216ENST00000636876 FEN1P39748 380 aaKnown RBP14.96□□□□□ -0.01
CLN6-216ENST00000636876 ARFIP2P53365 341 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 SF3A3Q12874 501 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLN6-216ENST00000636876 RPS6KA2Q15349 733 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 TERF2Q15554 542 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 DEFB109BQ30KR1 87 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 PDCD4Q53EL6 469 aaKnown RBP14.96□□□□□ -0.01
CLN6-216ENST00000636876 ZNF385BQ569K4 471 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 CPZQ66K79 652 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 ANKRD26P1Q6NSI1 321 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 FAM180BQ6P0A1 224 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 OR7A2PQ8NGA2 310 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 CATSPER2Q96P56 530 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 LPAR4Q99677 370 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 TUBB6Q9BUF5 446 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.01
CLN6-216ENST00000636876 SAGE2PA6NJ88 616 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 COX7A2P14406 83 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 GALNSP34059 522 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms