RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ASPHQ12797 758 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 IFT88Q13099 833 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 MPEG1Q2M385 716 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 C18orf63Q68DL7 685 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 RELL1Q8IUW5 271 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 L3MBTL4Q8NA19 623 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 OR52N2Q8NGI0 321 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
PNKP-225ENST00000636214 SDCCAG3Q96C92 435 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 GAL3ST4Q96RP7 486 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 TTTY12Q9BZ98 90 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 DEPPQ9NTK1 212 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 AHSPQ9NZD4 102 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 RNF11Q9Y3C5 154 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 ATG4BQ9Y4P1 393 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 EML6Q6ZMW3 1958 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 POC1B-GALNT4F8VUJ3 575 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 FOXE1O00358 373 aaPredicted RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 FAM58BPP0C7Q3 252 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 COL6A2P12110 1019 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 PRF1P14222 555 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 ZNF267Q14586 743 aaPredicted RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 GLE1Q53GS7 698 aaKnown RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 C10orf62Q5T681 223 aaPredicted RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 RNF111Q6ZNA4 994 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 NCCRP1Q6ZVX7 275 aaPredicted RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 DND1Q8IYX4 353 aaKnown RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 ASB5Q8WWX0 329 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 FBXL20Q96IG2 436 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 GPR78Q96P69 363 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 LDAHQ9H6V9 325 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 DDX31Q9H8H2 851 aaKnown RBP16.59■□□□□ 0.25
PNKP-225ENST00000636214 IL1RL2Q9HB29 575 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 PSD3Q9NYI0 1048 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 XPR1Q9UBH6 696 aa16.59■□□□□ 0.25
PNKP-225ENST00000636214 APCP25054 2843 aa16.58■□□□□ 0.25
PNKP-225ENST00000636214 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 A0A0A6YYD5 115 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 STX16-NPEPL1H3BU86 382 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 STX16O14662 325 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 PROM1O43490 865 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 PRKRAO75569 313 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 SEMA3DO95025 777 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 GPR75O95800 540 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 PIK3R1P27986 724 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 NEK2P51955 445 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 HERVK_113P63132 956 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 ERVK-8P63133 956 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 PIGGQ5H8A4 983 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 LGSNQ5TDP6 509 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 FRG2Q64ET8 278 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 OR52E8Q6IFG1 317 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 FGD2Q7Z6J4 655 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 CHERPQ8IWX8 916 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 PLD6Q8N2A8 252 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 FAM109AQ8N4B1 249 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 SLC15A4Q8N697 577 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 OR5M3Q8NGP4 307 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 WDR20Q8TBZ3 569 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 RIT1Q92963 219 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 CDK15Q96Q40 435 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 FRG2BQ96QU4 278 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 SMC6Q96SB8 1091 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 ERVK-6Q9BXR3 956 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 FUT8Q9BYC5 575 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 ELOVL6Q9H5J4 265 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 EXO5Q9H790 373 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 RYDENQ9NUL5 291 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 DMGDHQ9UI17 866 aaKnown RBP16.58■□□□□ 0.24
PNKP-225ENST00000636214 ERVK-19Q9WJR5 959 aa16.58■□□□□ 0.24
PNKP-225ENST00000636214 A0A0G2JMM0 328 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 A0A1W2PPB8 328 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 A0A1W2PRS3 328 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 GLOD5A6NK44 160 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 KIR3DP1A8MWS1 328 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 TRIM49D1C9J1S8 452 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 NPIPA2E9PIF3 369 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 NPIPA3F8WFD2 350 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 AIFM1O95831 613 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 SERPINB3P29508 390 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 BSGP35613 385 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 SPRED3Q2MJR0 410 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 HLA-DQA1Q5Y7H0 255 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 SLC22A10Q63ZE4 541 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 MILR1Q7Z6M3 343 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 C9orf40Q8IXQ3 194 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 TAGAPQ8N103 731 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 FAM13CQ8NE31 585 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 UHMK1Q8TAS1 419 aaKnown RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 RND1Q92730 232 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 ISL2Q96A47 359 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 SPACA9Q96E40 222 aaPredicted RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 MRPL57Q9BQC6 102 aaKnown RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 NTMT1Q9BV86 223 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms