RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ZBTB46Q86UZ6 589 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC2A12Q8TD20 617 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 EPS8L1Q8TE68 723 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZFP90Q8TF47 636 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ATG4CQ96DT6 458 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MAP3K3Q99759 626 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM109Q9BVC6 243 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 HCAR1Q9BXC0 346 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 DECR2Q9NUI1 292 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PLK2Q9NYY3 685 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TFR2Q9UP52 801 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM63AO94886 807 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZBTB11O95625 1053 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TRAPPC2P0DI81 140 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TRAPPC2BP0DI82 140 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CT45A10P0DMU9 189 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PRKCAP17252 672 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PRKACAP17612 351 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 MIPP30301 263 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 PLA2G16P53816 162 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TAS2R60P59551 318 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CD83Q01151 205 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CAMK2BQ13554 666 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 KCNJ8Q15842 424 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TUSC1Q2TAM9 212 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SYT6Q5T7P8 510 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SPPL2BQ8TCT7 592 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TFGQ92734 400 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 CMSS1Q9BQ75 279 aaKnown RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 SLC30A2Q9BRI3 323 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 BTRCQ9Y297 605 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-212ENST00000636194 WIF1Q9Y5W5 379 aa5.8□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PROM1O43490 865 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DIRAS1O95057 198 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 HLA-HP01893 362 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 STAG3L2P0CL84 134 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GABRB2P47870 512 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KCNJ11Q14654 390 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CTSL3PQ5NE16 218 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GLYATQ6IB77 296 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 BRAT1Q6PJG6 821 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM205Q6UW68 189 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF783Q6ZMS7 281 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TBC1D10CQ8IV04 446 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GALNT12Q8IXK2 581 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZCCHC17Q9NP64 241 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PRR5-ARHGAP8B1AHC4 643 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 RBBP9O75884 186 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CRYBA1P05813 215 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MRPS10P82664 201 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PPATQ06203 517 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ITPRIPL2Q3MIP1 535 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CES3Q6UWW8 571 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM173Q86WV6 379 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 FAM58AQ8N1B3 248 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 KDF1Q8NAX2 398 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ABHD11Q8NFV4 315 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TSSK3Q96PN8 268 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 P2RX7Q99572 595 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NANOGQ9H9S0 305 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DNAJC5BQ9UF47 199 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MCTS1Q9ULC4 181 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 B3GALT1Q9Y5Z6 326 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NFKBIEO00221 500 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CCL16O15467 120 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PLATP00750 562 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ABHD2P08910 425 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF28P17035 718 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 BCKDHBP21953 392 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 TGFB2P61812 414 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 HOXA4Q00056 320 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DLX2Q07687 328 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CRYZQ08257 329 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 PDE7AQ13946 482 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GRM2Q14416 872 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 QPCTQ16769 361 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF791Q3KP31 576 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 RHOUQ7L0Q8 258 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CNTN4Q8IWV2 1026 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SGPP2Q8IWX5 399 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 GCNT2Q8N0V5 402 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 C2orf73Q8N5S3 287 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ST7LQ8TDW4 575 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ADAMTS18Q8TE60 1221 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DPH3Q96FX2 82 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CDK15Q96Q40 435 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 DCLRE1CQ96SD1 692 aaKnown RBP5.79□□□□□ -1.48
SCN1A-212ENST00000636194 ZPBPQ9BS86 351 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 APMAPQ9HDC9 416 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 CNTN6Q9UQ52 1028 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MYOFQ9NZM1 2061 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 EDDM13A0A1B0GTR0 161 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 SLC22A2O15244 555 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 MED6O75586 246 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 APBB3O95704 486 aa5.79□□□□□ -1.48
SCN1A-212ENST00000636194 NFATC4Q14934 902 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms