RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ACBD3Q9H3P7 528 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 TRMT6Q9UJA5 497 aaKnown RBP16.53■□□□□ 0.24
CLN6-212ENST00000636020 C15orf41Q9Y2V0 281 aa16.53■□□□□ 0.24
CLN6-212ENST00000636020 A0A088AWK7 358 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 LDB3O75112 727 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 TNFSF13O75888 250 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 ZNF10P21506 573 aaPredicted RBP16.52■□□□□ 0.24
CLN6-212ENST00000636020 CD79BP40259 229 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 RGS4P49798 205 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
CLN6-212ENST00000636020 SPA17Q15506 151 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 NTRK2Q16620 822 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 PLXDC2Q6UX71 529 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 TMPRSS11BQ86T26 416 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 MYO1HQ8N1T3 1032 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 DIO2Q92813 273 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 SERINC2Q96SA4 455 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 FRMD8P1Q9BZ68 369 aaPredicted RBP16.52■□□□□ 0.24
CLN6-212ENST00000636020 RYDENQ9NUL5 291 aaKnown RBP16.52■□□□□ 0.24
CLN6-212ENST00000636020 FETUBQ9UGM5 382 aa16.52■□□□□ 0.24
CLN6-212ENST00000636020 ACTL6AO96019 429 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 CERS1P27544 350 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 PLA2G16P53816 162 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 AP1S2P56377 157 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 ID2Q02363 134 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 RCN2Q14257 317 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 BICRALQ6AI39 1079 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 KIAA1328Q86T90 577 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 CNGA4Q8IV77 575 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 UBL4BQ8N7F7 174 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 ZBED6CLQ96FA7 236 aaPredicted RBP16.51■□□□□ 0.23
CLN6-212ENST00000636020 AMBRA1Q9C0C7 1298 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 PACSIN2Q9UNF0 486 aaPredicted RBP16.51■□□□□ 0.23
CLN6-212ENST00000636020 DYRK1BQ9Y463 629 aa16.51■□□□□ 0.23
CLN6-212ENST00000636020 A0A1W2PNV4 684 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 SYCE3A1L190 88 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 HAUS5O94927 633 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 SNX4O95219 450 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 CCKARP32238 428 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 UGT2B10P36537 528 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 SLC1A2P43004 574 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 MSH2P43246 934 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 MTTPP55157 894 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 BASP1P80723 227 aaKnown RBP16.5■□□□□ 0.23
CLN6-212ENST00000636020 SNX1Q13596 522 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 THOC5Q13769 683 aaKnown RBP16.5■□□□□ 0.23
CLN6-212ENST00000636020 TOMM20Q15388 145 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 PAQR3Q6TCH7 311 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 C22orf34Q6ZV56 151 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 ZNF550Q7Z398 422 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 ATL1Q8WXF7 558 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 RILPQ96NA2 401 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 FAM111AQ96PZ2 611 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 ANGPTL4Q9BY76 406 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 PSD3Q9NYI0 1048 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 CLCF1Q9UBD9 225 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 CDC42EP3Q9UKI2 254 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 MAD1L1Q9Y6D9 718 aa16.5■□□□□ 0.23
CLN6-212ENST00000636020 LRRC14BA6NHZ5 514 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 HRKO00198 91 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 CBFA2T2O43439 604 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 TBX6O95947 436 aaPredicted RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 DHX34Q14147 1143 aaKnown RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 ETFDHQ16134 617 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 ADPRMQ3LIE5 342 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 ARMC3Q5W041 872 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 ABHD17CQ6PCB6 329 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 ZNF474Q6S9Z5 364 aaPredicted RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 PEX26Q7Z412 305 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 YRDCQ86U90 279 aaKnown RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 PACS2Q86VP3 889 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 THOC6Q86W42 341 aaKnown RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 CCDC170Q8IYT3 715 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 FAM83FQ8NEG4 500 aaPredicted RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 OR2L5Q8NG80 312 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 UCN3Q969E3 161 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 LINGO1Q96FE5 620 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 ZC3HAV1LQ96H79 300 aaKnown RBP16.49■□□□□ 0.23
CLN6-212ENST00000636020 G6PC3Q9BUM1 346 aa16.49■□□□□ 0.23
CLN6-212ENST00000636020 TCRBV7S3A2A0A539 114 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 MIF4GDA9UHW6 222 aaKnown RBP16.48■□□□□ 0.23
CLN6-212ENST00000636020 H0Y3Z8 333 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLN6-212ENST00000636020 COX7A2P14406 83 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 STT3AP46977 705 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 MASP1P48740 699 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 CDK16Q00536 496 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 ZNF704Q6ZNC4 412 aaPredicted RBP16.48■□□□□ 0.23
CLN6-212ENST00000636020 DGAT2L6Q6ZPD8 337 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 SH2D5Q6ZV89 423 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 BTLAQ7Z6A9 289 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 ZNF611Q8N823 705 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 TTLQ8NG68 377 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 SPPL2AQ8TCT8 520 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 CCT6BQ92526 530 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms