RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	HEXB	P07686	556 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NDUFV2	P19404	249 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	HOXD12	P35452	270 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TPTE	P56180	551 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KCTD8	Q6ZWB6	473 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NUP43	Q8NFH3	380 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FNDC8	Q8TC99	324 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SP7	Q8TDD2	431 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ISG20	Q96AZ6	181 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FBXL20	Q96IG2	436 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TRIM64C	A6NLI5	447 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SLC16A5	O15375	505 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CPNE3	O75131	537 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BCAS2	O75934	225 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CAPN3	P20807	821 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DNAJA1	P31689	397 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KCNJ5	P48544	419 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ACADVL	P49748	655 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SRSF5	Q13243	272 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ODF4	Q2M2E3	257 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LAPTM4B	Q86VI4	370 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NRROS	Q86YC3	692 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ERI1	Q8IV48	349 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	UBE2J2	Q8N2K1	259 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SVOPL	Q8N434	492 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PJA1	Q8NG27	643 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OR52E4	Q8NGH9	312 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TAMM41	Q96BW9	452 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	HS3ST2	Q9Y278	367 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PSMD9	O00233	223 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KDELR2	P33947	212 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	EIF1AX	P47813	144 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZNF630	Q2M218	657 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FLYWCH1	Q4VC44	716 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	EIPR1	Q53HC9	387 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LILRA6	Q6PI73	481 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BTN2A1	Q7KYR7	527 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OR56A1	Q8NGH5	318 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZNF480	Q8WV37	535 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TM9SF4	Q92544	642 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	C3orf30	Q96M34	536 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MRPL39	Q9NYK5	338 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	EMCN	Q9ULC0	261 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NUP214	P35658	2090 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PSIP1	O75475	530 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RPP14	O95059	124 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	IFI30	P13284	250 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TCN2	P20062	427 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BNIP3	Q12983	259 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NSDHL	Q15738	373 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TAZ	Q16635	292 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DENND5A	Q6IQ26	1287 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CGB2	Q6NT52	195 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	VTCN1	Q7Z7D3	282 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LKAAEAR1	Q8TD35	194 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	HTRA1	Q92743	480 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	IER2	Q9BTL4	223 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BCL2L14	Q9BZR8	327 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RACGAP1	Q9H0H5	632 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CARD8	Q9Y2G2	431 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	C1S	P09871	688 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZNF823	P16415	610 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PCSK2	P16519	638 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	GCA	P28676	217 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MAGEA6	P43360	314 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ID4	P47928	161 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SEMA3B	Q13214	749 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BLOC1S3	Q6QNY0	202 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DPPA4	Q7L190	304 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TSEN15	Q8WW01	171 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TSSK6	Q9BXA6	273 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	IL1RAP	Q9NPH3	570 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SMIM30	A4D0T7	59 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	HOXC11	O43248	304 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RNH1	P13489	461 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	VMAC	Q2NL98	169 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CRTC2	Q53ET0	693 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NDUFAF5	Q5TEU4	345 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TMEM168	Q9H0V1	697 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MEAF6	Q9HAF1	191 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MKS1	Q9NXB0	559 aa		13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RBM7	Q9Y580	266 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PLD2	O14939	933 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NKX3-2	P78367	333 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PPP2R2B	Q00005	443 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GSTM4	Q03013	218 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CMPK2	Q5EBM0	449 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KRT77	Q7Z794	578 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	HCAR2	Q8TDS4	363 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ZNF707	Q96C28	371 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C20orf27	Q9GZN8	174 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MALT1	Q9UDY8	824 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PCDHGA2	Q9Y5H1	932 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997		A0A0A6YYC8	382 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DAPL1	A0PJW8	107 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997		I3L1I5	382 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	IDH3B	O43837	385 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	AIRE	O43918	545 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PLG	P00747	810 aa	Predicted RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms