RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 C16orf78Q8WTQ4 265 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 DYDC1Q8WWB3 177 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 UCN3Q969E3 161 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 C19orf60Q96EN9 201 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 PPP3R2Q96LZ3 170 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 KCNK13Q9HB14 408 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 C5AR2Q9P296 337 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 PSME2Q9UL46 239 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 TMED5Q9Y3A6 229 aa14.47□□□□□ -0.09
CLN6-211ENST00000635754 CPAMD8Q8IZJ3 1885 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 WASHC1A8K0Z3 465 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 C17orf105B2RV13 164 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 K7EM74 188 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 SNNO75324 88 aaPredicted RBP14.46□□□□□ -0.09
CLN6-211ENST00000635754 PDGFAP04085 211 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 KIAA0040Q15053 153 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 PDCD2Q16342 344 aaPredicted RBP14.46□□□□□ -0.09
CLN6-211ENST00000635754 ATP6AP1LQ52LC2 224 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 ISLR2Q6UXK2 745 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 MMP21Q8N119 569 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 NFAM1Q8NET5 270 aaPredicted RBP14.46□□□□□ -0.09
CLN6-211ENST00000635754 PTPMT1Q8WUK0 201 aaPredicted RBP14.46□□□□□ -0.09
CLN6-211ENST00000635754 PSMF1Q92530 271 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 TM9SF4Q92544 642 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 KLHL29Q96CT2 875 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 EPS8L2Q9H6S3 715 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 MYNNQ9NPC7 610 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 PTGFRNQ9P2B2 879 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 TEKT2Q9UIF3 430 aa14.46□□□□□ -0.09
CLN6-211ENST00000635754 WBP11Q9Y2W2 641 aaKnown RBP14.46□□□□□ -0.09
CLN6-211ENST00000635754 ATP6AP2A0A1C7CYW4 349 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 KLF11O14901 512 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 PEX11AO75192 247 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 ATP6AP2O75787 350 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 SLC35E2P0CK97 266 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 MAPK1P28482 360 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 RFTN2Q52LD8 501 aaPredicted RBP14.45□□□□□ -0.1
CLN6-211ENST00000635754 HSP90B2PQ58FF3 399 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 IKBIPQ70UQ0 350 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 AMER2Q8N7J2 671 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 APCDD1LQ8NCL9 501 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 MORN4Q8NDC4 146 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 LRRC8CQ8TDW0 803 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 ELP5Q8TE02 316 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 ZNF75CPQ92670 426 aaPredicted RBP14.45□□□□□ -0.1
CLN6-211ENST00000635754 NCLNQ969V3 563 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 PPWD1Q96BP3 646 aaKnown RBP14.45□□□□□ -0.1
CLN6-211ENST00000635754 TUBGCP3Q96CW5 907 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 VMP1Q96GC9 406 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 ART5Q96L15 291 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 FCRL1Q96LA6 429 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 C3orf30Q96M34 536 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 INTS9Q9NV88 658 aaKnown RBP14.45□□□□□ -0.1
CLN6-211ENST00000635754 HEY2Q9UBP5 337 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 CES1P1Q9UKY3 287 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 PPIEQ9UNP9 301 aaKnown RBP14.45□□□□□ -0.1
CLN6-211ENST00000635754 ZNF780BQ9Y6R6 833 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 KALRNO60229 2985 aa14.45□□□□□ -0.1
CLN6-211ENST00000635754 CROCCQ5TZA2 2017 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 A8MUI8 341 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 DPM1O60762 260 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 ERAL1O75616 437 aaKnown RBP14.44□□□□□ -0.1
CLN6-211ENST00000635754 JUNP05412 331 aaKnown RBP14.44□□□□□ -0.1
CLN6-211ENST00000635754 CPMP14384 443 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 GALNSP34059 522 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 CLCN2P51788 898 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 XKP51811 444 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 OCRLQ01968 901 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 C2orf80Q0P641 193 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 NFATC3Q12968 1075 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 MFAP5Q13361 173 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 C6orf163Q5TEZ5 329 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 ABHD17BQ5VST6 288 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 H3F3CQ6NXT2 135 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 LINC00696Q6ZRV3 163 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 SLC2A12Q8TD20 617 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 ZNF354BQ96LW1 612 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 OR8D2Q9GZM6 311 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 MIEF1Q9NQG6 463 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 PNPOQ9NVS9 261 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 EHD3Q9NZN3 535 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 COPS7AQ9UBW8 275 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 UTS2RQ9UKP6 389 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 SPTA1P02549 2419 aa14.44□□□□□ -0.1
CLN6-211ENST00000635754 TRBV11-1A0A0K0K1C0 115 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 ATP8B1O43520 1251 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 PRB1P04280 392 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 PORP16435 677 aaPredicted RBP14.43□□□□□ -0.1
CLN6-211ENST00000635754 SDC1P18827 310 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 CSNK2A2P19784 350 aaPredicted RBP14.43□□□□□ -0.1
CLN6-211ENST00000635754 DDCP20711 480 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 SOX11P35716 441 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 GPR143P51810 404 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 MAD2L1Q13257 205 aaPredicted RBP14.43□□□□□ -0.1
CLN6-211ENST00000635754 SPRED3Q2MJR0 410 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 C6orf136Q5SQH8 315 aa14.43□□□□□ -0.1
CLN6-211ENST00000635754 B3GNTL1Q67FW5 361 aaPredicted RBP14.43□□□□□ -0.1
CLN6-211ENST00000635754 FAM71E1Q6IPT2 247 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms