RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ECT2LQ008S8 904 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ROR2Q01974 943 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ID2Q02363 134 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 EGR4Q05215 589 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZFP36L1Q07352 338 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ARHGAP1Q07960 439 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PMPCAQ10713 525 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 FUT7Q11130 342 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 STX5Q13190 355 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TNK1Q13470 666 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SF3B4Q15427 424 aaKnown RBP eCLIP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 DLG2Q15700 870 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 NAB2Q15742 525 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ATP13A5Q4VNC0 1218 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SPOUT1Q5T280 376 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 C10orf25Q5T742 122 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 DHRS7BQ6IAN0 325 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM211Q6ICI0 200 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SNRNP48Q6IEG0 339 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 C1orf94Q6P1W5 598 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM220Q6QAJ8 160 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 FIGLAQ6QHK4 219 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 FAM198BQ6UWH4 519 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 B3GLCTQ6Y288 498 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 RTL4Q6ZR62 310 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SLC26A9Q7LBE3 791 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CYP4Z1Q86W10 505 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CCDC25Q86WR0 208 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 FOXP4Q8IVH2 680 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 AQP12AQ8IXF9 295 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CCDC36Q8IYA8 594 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 KLHDC8AQ8IYD2 350 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 C10orf67Q8IYJ2 551 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZDHHC23Q8IYP9 409 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 MICU2Q8IYU8 434 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 MCOLN2Q8IZK6 566 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CLEC4FQ8N1N0 589 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 C17orf78Q8N4C9 275 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TBC1D19Q8N5T2 526 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PQLC3Q8N755 202 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CEP112Q8N8E3 955 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 GATSQ8NAP1 163 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 MLKLQ8NB16 471 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZNF248Q8NDW4 579 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CSNK2A3Q8NEV1 391 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ATL1Q8WXF7 558 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ARNTL2Q8WYA1 636 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PHYHIPQ92561 330 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 NSMAFQ92636 917 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 FCGR1BQ92637 280 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 HAS2Q92819 552 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SLCO2A1Q92959 643 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CCDC127Q96BQ5 260 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 METTL2AQ96IZ6 378 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZFYVE19Q96K21 471 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 LMLNQ96KR4 655 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SLITRK1Q96PX8 696 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 BBS4Q96RK4 519 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TESK2Q96S53 571 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 NPAS2Q99743 824 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PELOQ9BRX2 385 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CHRDL1Q9BU40 450 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SPATC1LQ9H0A9 340 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZMYND12Q9H0C1 365 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 RAB1BQ9H0U4 201 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SLCO5A1Q9H2Y9 848 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM231Q9H6L2 316 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 RANBP3Q9H6Z4 567 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SP140LQ9H930 580 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PARVBQ9HBI1 364 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 SGK2Q9HBY8 427 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 RANGRFQ9HD47 186 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CCNB1IP1Q9NPC3 277 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CHST11Q9NPF2 352 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 THSD1Q9NS62 852 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ZCCHC3Q9NUD5 404 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PIGVQ9NUD9 493 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM45AQ9NWC5 275 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PAG1Q9NWQ8 432 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CLEC5AQ9NY25 188 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 MRPL39Q9NYK5 338 aaKnown RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 AHSPQ9NZD4 102 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ADAM22Q9P0K1 906 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 RHCGQ9UBD6 479 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 ERRFI1Q9UJM3 462 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 PCDHA12Q9UN75 941 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 GPR132Q9UNW8 380 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 CA5BQ9Y2D0 317 aa2.76□□□□□ -1.97
PSPC1-208ENST00000635562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 TMEM184BQ9Y519 407 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 KLF2Q9Y5W3 355 aaPredicted RBP2.76□□□□□ -1.97
PSPC1-208ENST00000635562 DISP3Q9P2K9 1392 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 ZMYM2Q9UBW7 1377 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 TAF1LQ8IZX4 1826 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 ABCC4O15439 1325 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 MN1Q10571 1320 aaPredicted RBP2.75□□□□□ -1.97
PSPC1-208ENST00000635562 MAP3K15Q6ZN16 1313 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 TRAV26-1A0A087WT03 109 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 A0A0U1RRA0 63 aa2.75□□□□□ -1.97
PSPC1-208ENST00000635562 SMCO2A6NFE2 343 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms