RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SRPK3Q9UPE1 567 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SAMD4AQ9UPU9 718 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 B4GAT1O43505 415 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 UGDHO60701 494 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 RASAL1O95294 804 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 HBQ1P09105 142 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 C8orf89P0DMQ9 161 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SDHBP21912 280 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLDN6P56747 220 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 UBE2IP63279 158 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC5A12Q1EHB4 618 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 ANKRD46Q86W74 232 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM47BQ8NA70 645 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR8J3Q8NGG0 315 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SORBS1Q9BX66 1292 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 OCEL1Q9H607 264 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 EQTNQ9NQ60 294 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 PHF11Q9UIL8 331 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 OAZ3Q9UMX2 235 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 AP1M2Q9Y6Q5 423 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 HEXBP07686 556 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 RNH1P13489 461 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 NR1H2P55055 460 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 HSPB3Q12988 150 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 CSTF3Q12996 717 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 GBX1Q14549 363 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 CEACAM20Q6UY09 585 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 ALDH16A1Q8IZ83 802 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR9A4Q8NGU2 314 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 IKZF5Q9H5V7 419 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 RXFP3Q9NSD7 469 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 CUTCQ9NTM9 273 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 DDX18Q9NVP1 670 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 ATG2AQ2TAZ0 1938 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 PGRP06401 933 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TTKP33981 857 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TRPC1P48995 793 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SHC2P98077 582 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 LRRC23Q53EV4 343 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 OTUD3Q5T2D3 398 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TRIM46Q7Z4K8 759 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SGPP1Q9BX95 441 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF556Q9HAH1 456 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 DMRT3Q9NQL9 472 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLCA3PQ9Y6N3 262 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 IGHV5-51A0A0C4DH38 117 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 KRT75O95678 551 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TMEM35AQ53FP2 167 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CYBRD1Q53TN4 286 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 DTWD1Q8N5C7 304 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NETO1Q8TDF5 533 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 THAP11Q96EK4 314 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SCARF2Q96GP6 870 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADNPQ9H2P0 1102 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SCN3BQ9NY72 215 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 REV3LO60673 3130 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 H3BSA7 217 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 PEX12O00623 359 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CLEC3AO75596 197 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 RAP2AP10114 183 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NR2F6P10588 404 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CERS1P27544 350 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 BCL6P41182 706 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC6A12P48065 614 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 ABHD18Q0P651 414 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TCF15Q12870 199 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 DEPDC1Q5TB30 811 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 BAHD1Q8TBE0 780 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 METTL2AQ96IZ6 378 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF583Q96ND8 569 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC25A37Q9NYZ2 338 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 C3orf18Q9UK00 162 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NAALAD2Q9Y3Q0 740 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 KLHL18O94889 574 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 GSNP06396 782 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 CKMT1AP12532 417 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 HPGDP15428 266 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 FEN1P39748 380 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NKG7Q16617 165 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4C11Q6IEV9 310 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 NOXRED1Q6NXP6 359 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 COMMD6Q7Z4G1 85 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 TAGAPQ8N103 731 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 C10orf111Q8N326 155 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SETD9Q8NE22 299 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 MAGEE2Q8TD90 523 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 USP7Q93009 1102 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR2A14Q96R47 310 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4K3Q96R72 315 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 GAL3ST4Q96RP7 486 aa11.8□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC6A13Q9NSD5 602 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms