RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 P2RX2Q9UBL9 471 aa20.85■□□□□ 0.93
PNKP-220ENST00000627232 PHF11Q9UIL8 331 aa20.85■□□□□ 0.93
PNKP-220ENST00000627232 BLOC1S6Q9UL45 172 aa20.85■□□□□ 0.93
PNKP-220ENST00000627232 PSME2Q9UL46 239 aa20.85■□□□□ 0.93
PNKP-220ENST00000627232 ENPP4Q9Y6X5 453 aa20.85■□□□□ 0.93
PNKP-220ENST00000627232 IGHV1OR15-9A0A0B4J2B8 117 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 PRAMEF25A6NGN4 478 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 GLOD5A6NK44 160 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 AHCYL1O43865 530 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 KIF1CO43896 1103 aaKnown RBP20.84■□□□□ 0.93
PNKP-220ENST00000627232 PRAMEF10O60809 474 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 CTSVO60911 334 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 PRKRAO75569 313 aaKnown RBP20.84■□□□□ 0.93
PNKP-220ENST00000627232 ERAL1O75616 437 aaKnown RBP20.84■□□□□ 0.93
PNKP-220ENST00000627232 CD247P20963 164 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 CRHBPP24387 322 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 XCR1P46094 333 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 KCNC4Q03721 635 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 CD47Q08722 323 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 SKIV2LQ15477 1246 aaKnown RBP20.84■□□□□ 0.93
PNKP-220ENST00000627232 MAPK11Q15759 364 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 ZNF773Q6PK81 442 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 GALNT5Q7Z7M9 940 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 PARGQ86W56 976 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 ATG16L2Q8NAA4 619 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 PATE1Q8WXA2 126 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 OR51I1Q9H343 314 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 RIBC2Q9H4K1 309 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 C2orf42Q9NWW7 574 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 CA14Q9ULX7 337 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 TESMINQ9Y4I5 508 aa20.84■□□□□ 0.93
PNKP-220ENST00000627232 A0A0J9YY10 115 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 A0A1W2PPC1 479 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 MFN2O95140 757 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 NR2F6P10588 404 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 RHCEP18577 417 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 TNFRSF1BP20333 461 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 MATN1P21941 496 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 TTKP33981 857 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 MPIP34949 423 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 OR1E2P47887 323 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 SPIBQ01892 262 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 ZBED5Q49AG3 693 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 GPR141Q7Z602 305 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 TTC29Q8NA56 475 aaPredicted RBP20.83■□□□□ 0.93
PNKP-220ENST00000627232 MIPOL1Q8TD10 442 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 RAB8BQ92930 207 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 FCRL4Q96PJ5 515 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 ZNF607Q96SK3 696 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 PIP5K1AQ99755 562 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 ZFYVE21Q9BQ24 234 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 PSD2Q9BQI7 771 aa20.83■□□□□ 0.93
PNKP-220ENST00000627232 NPLQ9BXD5 320 aaPredicted RBP20.83■□□□□ 0.93
PNKP-220ENST00000627232 FAM32AQ9Y421 112 aaKnown RBP20.83■□□□□ 0.93
PNKP-220ENST00000627232 A0A0J9YVX5 310 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 CCDC160A6NGH7 325 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 WASHC1A8K0Z3 465 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 E9PQ18 207 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 IFNW1P05000 195 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 FHP07954 510 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ANXA8P13928 327 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ZNF10P21506 573 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 POLR2IP36954 125 aaKnown RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 BUD31P41223 144 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 CLK3P49761 638 aaKnown RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 HMGA2P52926 109 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 TNFRSF17Q02223 184 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 GAS6Q14393 721 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 CCDC85BQ15834 202 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 CTU2Q2VPK5 515 aaKnown RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 RPS26P11Q5JNZ5 115 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 MANEAQ5SRI9 462 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 BROXQ5VW32 411 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 RNF44Q7L0R7 432 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ZNF605Q86T29 641 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 SAMD14Q8IZD0 417 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 SMYD1Q8NB12 490 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 BAHD1Q8TBE0 780 aaPredicted RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 APOBEC4Q8WW27 367 aaKnown RBP20.83■□□□□ 0.92
PNKP-220ENST00000627232 ZNF566Q969W8 418 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ZNF681Q96N22 645 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 PCED1AQ9H1Q7 454 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ADNPQ9H2P0 1102 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 LTB4R2Q9NPC1 389 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 PTTG2Q9NZH5 202 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 ZNF780BQ9Y6R6 833 aa20.83■□□□□ 0.92
PNKP-220ENST00000627232 H3BSA7 217 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 P2RX6O15547 441 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 EMC8O43402 210 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 SLC28A2O43868 658 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 CELA2BP08218 269 aaPredicted RBP20.82■□□□□ 0.92
PNKP-220ENST00000627232 OR12D1P0DN82 309 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 PPP2R1BP30154 601 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 FZD5Q13467 585 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 RAPSNQ13702 412 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 GNA13Q14344 377 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 MEP1AQ16819 746 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 ZNF542PQ5EBM4 170 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 B3GNT6Q6ZMB0 384 aa20.82■□□□□ 0.92
PNKP-220ENST00000627232 ABHD13Q7L211 337 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms