RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZNF462Q96JM2 2506 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 TRBV11-1A0A0K0K1C0 115 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 J3QKU1 62 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 MASP2O00187 686 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 SLITRK5O94991 958 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 ANXA4P09525 319 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 PCSK2P16519 638 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 CSNK2A2P19784 350 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 MAPK1P28482 360 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 HTR6P50406 440 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 TNFSF10P50591 281 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 OR6Y1Q8NGX8 325 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 RAB3IL1Q8TBN0 382 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 PTPMT1Q8WUK0 201 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 RIT1Q92963 219 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 NCLNQ969V3 563 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 ERP27Q96DN0 273 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 C11orf24Q96F05 449 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 PPP3R2Q96LZ3 170 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 MECRQ9BV79 373 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 EPN3Q9H201 632 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 TMBIM4Q9HC24 238 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 YARS2Q9Y2Z4 477 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 CNTRLQ7Z7A1 2325 aa13.06□□□□□ -0.32
SNRPA1-216ENST00000626000 TMEM120BA0PK00 339 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 A8MUA0 341 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 PRAMEF2O60811 474 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 HSPA4LO95757 839 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 GBAP04062 536 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 ATP1B1P05026 303 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CELA2AP08217 269 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 PLA2G2AP14555 144 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CD46P15529 392 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CREB1P16220 341 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 PORP16435 677 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CYB561P49447 251 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 GPR143P51810 404 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 FOXA1P55317 472 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 MLF1P58340 268 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TLE1Q04724 770 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 NR6A1Q15406 480 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CRLF3Q8IUI8 442 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 GALNT12Q8IXK2 581 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TMEM178AQ8NBL3 297 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 FAM98AQ8NCA5 519 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 NUBPLQ8TB37 319 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TWIST2Q8WVJ9 160 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 C5orf34Q96MH7 638 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 LRTM1Q9HBL6 345 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 MYNNQ9NPC7 610 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 ENTPD4Q9Y227 616 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 DNAJC15Q9Y5T4 150 aa13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 SMG1Q96Q15 3661 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-216ENST00000626000 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 SEC22BO75396 215 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 WDPCPO95876 746 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 CHRNGP07510 517 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 CPMP14384 443 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 H2AFXP16104 143 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 RPL3P39023 403 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 ASMTP46597 345 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 HLCSP50747 726 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 XKP51811 444 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 PSPHP78330 225 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 OC90Q02509 493 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 ATG16L1Q676U5 607 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 RNF111Q6ZNA4 994 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC29A4Q7RTT9 530 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 FAM9CQ8IZT9 166 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 OR7G1Q8NGA0 311 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms