RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 UBE2Q1Q7Z7E8 422 aa14.46□□□□□ -0.09
PMS1-221ENST00000624204 SRFBP1Q8NEF9 429 aaKnown RBP14.46□□□□□ -0.09
PMS1-221ENST00000624204 TMEM163Q8TC26 289 aa14.46□□□□□ -0.09
PMS1-221ENST00000624204 MED8Q96G25 268 aa14.46□□□□□ -0.09
PMS1-221ENST00000624204 PDFQ9HBH1 243 aa14.46□□□□□ -0.09
PMS1-221ENST00000624204 VCANP13611 3396 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 A0A1W2PPL8 197 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 F5H5T6 163 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 IFNW1P05000 195 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 LGALSLQ3ZCW2 172 aaPredicted RBP14.46□□□□□ -0.1
PMS1-221ENST00000624204 RBFAQ8N0V3 343 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 HTATIP2Q9BUP3 242 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 POLR2J3Q9H1A7 115 aaKnown RBP14.46□□□□□ -0.1
PMS1-221ENST00000624204 GPR52Q9Y2T5 361 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 AUP1Q9Y679 476 aa14.46□□□□□ -0.1
PMS1-221ENST00000624204 CCDC88CQ9P219 2028 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 QSOX1O00391 747 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 LANCL1O43813 399 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 B4GALT3O60512 393 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 HLA-DQB1P01920 261 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 BPIP17213 487 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 HOXD10P28358 340 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 BDKRB1P46663 353 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 CTAG1AP78358 180 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 COX10Q12887 443 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 KCNC3Q14003 757 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 GRM7Q14831 915 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 PLK5Q496M5 336 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 KANSL1Q7Z3B3 1105 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 MARCH9Q86YJ5 346 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 CPA6Q8N4T0 437 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 OR8J2Q8NGG1 315 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 OR52I1Q8NGK6 324 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 SAMD11Q96NU1 681 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 SORCS2Q96PQ0 1159 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 RBP7Q96R05 134 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 MAB21L2Q9Y586 359 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 CDH23Q9H251 3354 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 ANXA4P09525 319 aaPredicted RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 RPS12P25398 132 aaKnown RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 NUP62P37198 522 aaPredicted RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 XCR1P46094 333 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 GBX2P52951 348 aaPredicted RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 IRF8Q02556 426 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 DEF8Q6ZN54 512 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 FAM92BQ6ZTR7 304 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 UBE2R2Q712K3 238 aaPredicted RBP14.45□□□□□ -0.1
PMS1-221ENST00000624204 OLIG3Q7RTU3 272 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 GPR155Q7Z3F1 870 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 GPAT4Q86UL3 456 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 GPALPP1Q8IXQ4 340 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 UFD1Q92890 307 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 LRR1Q96L50 414 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 ZSWIM3Q96MP5 696 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 VPS29Q9UBQ0 182 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 CORO2BQ9UQ03 480 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 PCDHB7Q9Y5E2 793 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 ENPP4Q9Y6X5 453 aa14.45□□□□□ -0.1
PMS1-221ENST00000624204 HEPACAM2A8MVW5 462 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 RAB36O95755 333 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 PLATP00750 562 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 HIST1H2AGP0C0S8 130 aaPredicted RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 ACSM4P0C7M7 580 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 OSMP13725 252 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 CPEP16870 476 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 HIST1H2ADP20671 130 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 CHI3L1P36222 383 aaPredicted RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 ATP6V1E1P36543 226 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 ACLYP53396 1101 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 CDK6Q00534 326 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 RIN1Q13671 783 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 TUSC1Q2TAM9 212 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 CEACAM20Q6UY09 585 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 LHFPL3Q86UP9 236 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 HS6ST3Q8IZP7 471 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 OR8J1Q8NGP2 316 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 NEIL3Q8TAT5 605 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 EID2BQ96D98 161 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 SENP5Q96HI0 755 aaPredicted RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 HIST1H2AHQ96KK5 128 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 HIST1H2AJQ99878 128 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 SLC35A5Q9BS91 424 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 H2AFJQ9BTM1 129 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 MRPL15Q9P015 296 aaKnown RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 IL17CQ9P0M4 197 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 HCN3Q9P1Z3 774 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 ATPIF1Q9UII2 106 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 M0R233 179 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 SSNA1O43805 119 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 CH25HO95992 272 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 TACR2P21452 398 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 PPIBP23284 216 aaKnown RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 SRP9P49458 86 aaKnown RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 WNT4P56705 351 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 PURAQ00577 322 aaKnown RBP14.44□□□□□ -0.1
PMS1-221ENST00000624204 NTRK2Q16620 822 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 IDNKQ5T6J7 187 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 RASSF6Q6ZTQ3 369 aa14.44□□□□□ -0.1
PMS1-221ENST00000624204 TRILQ7L0X0 811 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms