RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	PATJ	Q8NI35	1801 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	NIN	Q8N4C6	2090 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	SAP18	O00422	153 aa	Known RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF197	O14709	1029 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	RFPL3	O75679	317 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	C6orf47	O95873	294 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	CTRB1	P17538	263 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	PTX3	P26022	381 aa	Predicted RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	MAPK8	P45983	427 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	AP1S2	P56377	157 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	RHAG	Q02094	409 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	LIPJ	Q5W064	366 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	CTRB2	Q6GPI1	263 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TPRG1	Q6ZUI0	275 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	KCTD20	Q7Z5Y7	419 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	FAM46D	Q8NEK8	389 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	RIT1	Q92963	219 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	HYLS1	Q96M11	299 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	PAK6	Q9NQU5	681 aa	Predicted RBP	13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	MARCH5	Q9NX47	278 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	SCML1	Q9UN30	329 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	IFNA14	P01570	189 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	PFN3	P60673	137 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ABAT	P80404	500 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF91	Q05481	1191 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	SYTL3	Q4VX76	610 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF783	Q6ZMS7	281 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	KATNB1	Q9BVA0	655 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	MND1	Q9BWT6	205 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TVP23B	Q9NYZ1	205 aa		13.7	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRIM77	I1YAP6	450 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ACADM	P11310	421 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ATP1B2	P14415	290 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	CD22	P20273	847 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ETV3	P41162	512 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	HBA1	P69905	142 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	CDK6	Q00534	326 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	TEX261	Q6UWH6	196 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	SHF	Q7M4L6	423 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	C2orf15	Q8WU43	125 aa	Known RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	KCTD7	Q96MP8	289 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZDHHC6	Q9H6R6	413 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	NDUFB11	Q9NX14	153 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045		U3KQ87	197 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	SH3D21	A4FU49	640 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	OR5K3	A6NET4	321 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	GLTPD2	A6NH11	291 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	AKAP8	O43823	692 aa	Known RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ETHE1	O95571	254 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	AGFG1	P52594	562 aa	Known RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	SMS	P52788	366 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	RAB8A	P61006	207 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	MBTPS1	Q14703	1052 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	C17orf99	Q6UX52	265 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	CBARP	Q8N350	705 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	POF1B	Q8WVV4	589 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ASZ1	Q8WWH4	475 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	GATAD2B	Q8WXI9	593 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	KLF16	Q9BXK1	252 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	MED28	Q9H204	178 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	FTSJ1	Q9UET6	329 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ENOPH1	Q9UHY7	261 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	BTNL2	Q9UIR0	455 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZAR1L	A6NP61	321 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	FLT3LG	P49771	235 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	RGS1	Q08116	209 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	RBBP4	Q09028	425 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	FAM180B	Q6P0A1	224 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRIM40	Q6P9F5	258 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	FOXJ1	Q92949	421 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	MSLNL	Q96KJ4	702 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	SCN10A	Q9Y5Y9	1956 aa		13.69	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRBV4-1	A0A0J9YWV2	114 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRBC2	A0A5B9	178 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	TLX2	O43763	284 aa	Predicted RBP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	SOCS5	O75159	536 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	ADAMTS4	O75173	837 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	ALDH1A1	P00352	501 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	IDS	P22304	550 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	STK19	P49842	368 aa	Predicted RBP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	RPS13	P62277	151 aa	Known RBP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	GALE	Q14376	348 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	SUZ12	Q15022	739 aa	Known RBP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	RNASE12	Q5GAN4	147 aa	Known RBP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	AGTRAP	Q6RW13	159 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	CASP12	Q6UXS9	341 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	FAM181A	Q8N9Y4	354 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	SCAMP4	Q969E2	229 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC22A12	Q96S37	553 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	PIP5K1A	Q99755	562 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	MAPKAP1	Q9BPZ7	522 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC28A3	Q9HAS3	691 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	ING4	Q9UNL4	249 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	BRCA2	P51587	3418 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRRG1	O14668	218 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	DPM1	O60762	260 aa		13.68	□□□□□ -0.22
SYNRG-231	ENST00000622045	GALT	P07902	379 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms