RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ASB15Q8WXK1 588 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 FAM111AQ96PZ2 611 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 GPATCH1Q9BRR8 931 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 TTYH2Q9BSA4 534 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 SARGQ9BW04 601 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 SGPP1Q9BX95 441 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 LIME1Q9H400 295 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 NECTIN3Q9NQS3 549 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 PNO1Q9NRX1 252 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 DEPPQ9NTK1 212 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ARL15Q9NXU5 204 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 MOCS1Q9NZB8 636 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 HEY2Q9UBP5 337 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 MTO1Q9Y2Z2 717 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 YARS2Q9Y2Z4 477 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 MPDZO75970 2070 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 CAPN14A8MX76 684 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TRIM49D1C9J1S8 452 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 BCKDKO14874 412 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 SNNO75324 88 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 OR2J2O76002 312 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 INHBAP08476 426 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 SNRPAP09012 282 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 DNASE1P24855 282 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 RASSF2P50749 326 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 DGKQP52824 942 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 RAB8AP61006 207 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 OCRLQ01968 901 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 FOXD4Q12950 439 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 SNTB1Q13884 538 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 CSHL1Q14406 222 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 PHKG1Q16816 387 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 HECTD2Q5U5R9 776 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 IL20RBQ6UXL0 311 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 GK5Q6ZS86 529 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 KIAA0408Q6ZU52 694 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 STRA8Q7Z7C7 330 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLK1-215ENST00000621181 OR2M7Q8NG81 312 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 OR4K1Q8NGD4 311 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 GOT1L1Q8NHS2 421 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 NT5CQ8TCD5 201 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 UTP15Q8TED0 518 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 NCLNQ969V3 563 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 VMP1Q96GC9 406 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 NSL1Q96IY1 281 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 C7orf26Q96N11 449 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 NDNQ99608 321 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 AARSD1Q9BTE6 412 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 TMEM120AQ9BXJ8 343 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TTTY12Q9BZ98 90 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 GSX1Q9H4S2 264 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 ZDHHC11Q9H8X9 412 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 LIN28AQ9H9Z2 209 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 C20orf96Q9NUD7 363 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 TAS2R13Q9NYV9 303 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ZFATQ9P243 1243 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 DCTN4Q9UJW0 460 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 FBXO5Q9UKT4 447 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ACAD8Q9UKU7 415 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 PLEKHA6Q9Y2H5 1048 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 MAD1L1Q9Y6D9 718 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 ZCWPW2A0A1B0GU75 182 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 MAGEB16A2A368 324 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 SDR42E2A6NKP2 422 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 G3V3Y1 287 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 GSC2O15499 205 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 ZFAND5O76080 213 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 HAUS5O94927 633 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 RPSAP08865 295 aaKnown RBP7.26□□□□□ -1.25
CLK1-215ENST00000621181 CRHR1P34998 444 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 AHRP35869 848 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 KIR2DL3P43628 341 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 ARFIP2P53365 341 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 SLC13A2Q13183 592 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 CATSPEREQ5SY80 951 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 TRMT10BQ6PF06 316 aaKnown RBP7.26□□□□□ -1.25
CLK1-215ENST00000621181 ARSKQ6UWY0 536 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 C16orf47Q6ZP98 133 aaPredicted RBP7.26□□□□□ -1.25
CLK1-215ENST00000621181 GPALPP1Q8IXQ4 340 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 LMNTD2Q8IXW0 634 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 PPM1NQ8N819 430 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 GPATCH11Q8N954 259 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 TRPV3Q8NET8 790 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 NEIL2Q969S2 332 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 CFAP36Q96G28 342 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 TSNARE1Q96NA8 513 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 OR4K3Q96R72 315 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 BTBD10Q9BSF8 475 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 FAM167BQ9BTA0 163 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 TRIM54Q9BYV2 358 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 LDAHQ9H6V9 325 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 CLK4Q9HAZ1 481 aaKnown RBP7.26□□□□□ -1.25
CLK1-215ENST00000621181 BATF3Q9NR55 127 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 ZNF358Q9NW07 568 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 ALKBH4Q9NXW9 302 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 Q9UFV3 132 aa7.26□□□□□ -1.25
CLK1-215ENST00000621181 MMACHCQ9Y4U1 282 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms