RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PTPMT1Q8WUK0 201 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 TANKQ92844 425 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 MARVELD3Q96A59 401 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 TAAR6Q96RI8 345 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 BARD1Q99728 777 aaKnown RBP14.88□□□□□ -0.03
BRCA1-228ENST00000618469 HES7Q9BYE0 225 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 MID1IP1Q9NPA3 183 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 KLHL1Q9NR64 748 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 OLAHQ9NV23 265 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 MKS1Q9NXB0 559 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 LRFN1Q9P244 771 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 ADAM29Q9UKF5 820 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 POLQO75417 2590 aa14.88□□□□□ -0.03
BRCA1-228ENST00000618469 ANKUB1A6NFN9 424 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 PRKNO60260 465 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-228ENST00000618469 RASAL1O95294 804 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 ESRRBO95718 433 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 HSD3B1P14060 373 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 CPA3P15088 417 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-228ENST00000618469 HSD3B2P26439 372 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 GPR143P51810 404 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 MAPK12P53778 367 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 NAGLUP54802 743 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 RIPPLY3P57055 190 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 GALNT1Q10472 559 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-228ENST00000618469 ELOAQ14241 798 aaKnown RBP14.87□□□□□ -0.03
BRCA1-228ENST00000618469 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 CCNYL2Q5T2Q4 361 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 FRMD7Q6ZUT3 714 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 MREGQ8N565 214 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 C1orf52Q8N6N3 182 aaKnown RBP14.87□□□□□ -0.03
BRCA1-228ENST00000618469 ZNF321PQ8N8H1 164 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 FAR1Q8WVX9 515 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 NMRK1Q9NWW6 199 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 COPS7AQ9UBW8 275 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
BRCA1-228ENST00000618469 CCDC151A5D8V7 595 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 WASHC1A8K0Z3 465 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 DYRK3O43781 588 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 OR10H2O60403 315 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ULK1O75385 1050 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 CRCPO75575 148 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ITGA10O75578 1167 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 SLC25A12O75746 678 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 NEURL1O76050 574 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ZFAND5O76080 213 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 GPR75O95800 540 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 CD46P15529 392 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 CHN1P15882 459 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 CYB561P49447 251 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 FOXA1P55317 472 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 DNAJB13P59910 316 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 NAA20P61599 178 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 PCLAFQ15004 111 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 NDUFAF5Q5TEU4 345 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 LIPMQ5VYY2 423 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 SPINK14Q6IE38 97 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 HSDL2Q6YN16 418 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 DGAT2L6Q6ZPD8 337 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ST13P4Q8IZP2 240 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ARMC10Q8N2F6 343 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 HORMAD2Q8N7B1 307 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 TMEM178AQ8NBL3 297 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ST6GALNAC3Q8NDV1 305 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 C7orf57Q8NEG2 295 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 UCN3Q969E3 161 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 PPWD1Q96BP3 646 aaKnown RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 SCMH1Q96GD3 660 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 SLX1AQ9BQ83 275 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 PELOQ9BRX2 385 aaKnown RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 CNPPD1Q9BV87 410 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ACPTQ9BZG2 426 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ROPN1BQ9BZX4 212 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 LIN28AQ9H9Z2 209 aaKnown RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 ROPN1Q9HAT0 212 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-228ENST00000618469 OXSMQ9NWU1 459 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 VPS29Q9UBQ0 182 aa14.86□□□□□ -0.03
BRCA1-228ENST00000618469 SPAG7O75391 227 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 EDN3P14138 238 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 PIK3R1P27986 724 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 HLCSP50747 726 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 SSR4P51571 173 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 HMGCS1Q01581 520 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 SRSF11Q05519 484 aaKnown RBP14.85□□□□□ -0.03
BRCA1-228ENST00000618469 C16orf47Q6ZP98 133 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-228ENST00000618469 GALNTL5Q7Z4T8 443 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 C10orf107Q8IVU9 208 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 CYP4Z2PQ8N1L4 340 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 TMEM156Q8N614 296 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 GBP7Q8N8V2 638 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-228ENST00000618469 BANPQ8N9N5 519 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 DOK4Q8TEW6 326 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 ZNF721Q8TF20 911 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 NR4A3Q92570 626 aa14.85□□□□□ -0.03
BRCA1-228ENST00000618469 RBM18Q96H35 190 aaKnown RBP14.85□□□□□ -0.03
BRCA1-228ENST00000618469 ART5Q96L15 291 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms