RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SLX1AQ9BQ83 275 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 LRFN1Q9P244 771 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 GLOD5A6NK44 160 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 TMEM200CA6NKL6 621 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 PRKNO60260 465 aaPredicted RBP23.15■■□□□ 1.3
PMS1-220ENST00000618056 ZIC2O95409 532 aaPredicted RBP23.15■■□□□ 1.3
PMS1-220ENST00000618056 GALNSP34059 522 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 CYB561P49447 251 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 HTR6P50406 440 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 HLCSP50747 726 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 NDUFAF5Q5TEU4 345 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 SPINK14Q6IE38 97 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 C1orf52Q8N6N3 182 aaKnown RBP23.15■■□□□ 1.3
PMS1-220ENST00000618056 ST6GALNAC3Q8NDV1 305 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 ZNF721Q8TF20 911 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 THAP3Q8WTV1 239 aaPredicted RBP23.15■■□□□ 1.3
PMS1-220ENST00000618056 CHTF18Q8WVB6 975 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 ACPTQ9BZG2 426 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 COPS7AQ9UBW8 275 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 TIMM22Q9Y584 194 aa23.15■■□□□ 1.3
PMS1-220ENST00000618056 WASHC1A8K0Z3 465 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 PGRMC2O15173 223 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 DYRK3O43781 588 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 ITGA10O75578 1167 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 RASAL1O95294 804 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 CD46P15529 392 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 ST13P50502 369 aaKnown RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 TRA2BP62995 288 aaKnown RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 MRPL49Q13405 166 aaKnown RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 C10orf107Q8IVU9 208 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 DNAJB8Q8NHS0 232 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 SENP5Q96HI0 755 aaPredicted RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 ART5Q96L15 291 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 C5orf34Q96MH7 638 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 OLAHQ9NV23 265 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 MYOTQ9UBF9 498 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 YARS2Q9Y2Z4 477 aaKnown RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 USP9YO00507 2555 aaPredicted RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 DIDO1Q9BTC0 2240 aaKnown RBP23.14■■□□□ 1.29
PMS1-220ENST00000618056 EML6Q6ZMW3 1958 aa23.14■■□□□ 1.29
PMS1-220ENST00000618056 IGKV3-11P04433 115 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 SLC35E2P0CK97 266 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 EDN3P14138 238 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 CHN1P15882 459 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 FOXA1P55317 472 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 ZNF844Q08AG5 666 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 SPRED3Q2MJR0 410 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 DGAT2L6Q6ZPD8 337 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 ZNF227Q86WZ6 799 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 ZNF321PQ8N8H1 164 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 TMEM178AQ8NBL3 297 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 UCN3Q969E3 161 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 PPWD1Q96BP3 646 aaKnown RBP23.13■■□□□ 1.29
PMS1-220ENST00000618056 FBXL20Q96IG2 436 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 SMC6Q96SB8 1091 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 SENP1Q9P0U3 644 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 MCM8Q9UJA3 840 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 HECTD1Q9ULT8 2610 aa23.13■■□□□ 1.29
PMS1-220ENST00000618056 SETXQ7Z333 2677 aaKnown RBP23.13■■□□□ 1.29
PMS1-220ENST00000618056 ANKUB1A6NFN9 424 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 TRIM13O60858 407 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 CRYABP02511 175 aaKnown RBP23.12■■□□□ 1.29
PMS1-220ENST00000618056 SP1P08047 785 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 PIK3R1P27986 724 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 RNF4P78317 190 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 SRSF1Q07955 248 aaKnown RBP eCLIP23.12■■□□□ 1.29
PMS1-220ENST00000618056 ASPHQ12797 758 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 SPIN4Q56A73 249 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 TM4SF18Q96CE8 201 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 FAM111AQ96PZ2 611 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 TRMOQ9BU70 441 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 PCDHA9Q9Y5H5 950 aa23.12■■□□□ 1.29
PMS1-220ENST00000618056 C1orf226A1L170 272 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 OR10H2O60403 315 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SLC25A12O75746 678 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SSR4P51571 173 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 HMGCS1Q01581 520 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 KRT71Q3SY84 523 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SLC25A25Q6KCM7 469 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 FAM26EQ8N5C1 309 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 TMEM156Q8N614 296 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 OR4K14Q8NGD5 310 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 OR5L2Q8NGL0 311 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 TCP10LQ8TDR4 215 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 NR4A3Q92570 626 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 C11orf24Q96F05 449 aaPredicted RBP23.11■■□□□ 1.29
PMS1-220ENST00000618056 GATA5Q9BWX5 397 aaPredicted RBP23.11■■□□□ 1.29
PMS1-220ENST00000618056 HES7Q9BYE0 225 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 KLHL1Q9NR64 748 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SIRT5Q9NXA8 310 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SLC17A7Q9P2U7 560 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 CES1P1Q9UKY3 287 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SPAG7O75391 227 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 ERLIN1O75477 346 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 HK2P52789 917 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 ACSM2AQ08AH3 577 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 GTF3C1Q12789 2109 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 UBAP2LQ14157 1087 aaKnown RBP23.11■■□□□ 1.29
PMS1-220ENST00000618056 ACSM2BQ68CK6 577 aa23.11■■□□□ 1.29
PMS1-220ENST00000618056 SLC48A1Q6P1K1 146 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms