RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 WBP11Q9Y2W2 641 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 CUL9Q8IWT3 2517 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 DOCK8Q8NF50 2099 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TRBV4-1A0A0J9YWV2 114 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 IQCMA0A1B0GVH7 501 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 FAAHO00519 579 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 CSO75390 466 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 CCNKO75909 580 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TRAPPC2P0DI81 140 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TRAPPC2BP0DI82 140 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 MAGP20916 626 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ELAVL4P26378 380 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 PDHA2P29803 388 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 RCVRNP35243 200 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 SOAT1P35610 550 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 CRYBB2P43320 205 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 HTR3AP46098 478 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 OR2B6P58173 313 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TMEM115Q12893 351 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 RSBN1Q5VWQ0 802 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ERAP2Q6P179 960 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 KIAA0907Q7Z7F0 614 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ADIPOR2Q86V24 386 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 NRSN1Q8IZ57 195 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 SLC5A11Q8WWX8 675 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TMEM80Q96HE8 168 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 SLC6A18Q96N87 628 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 SNX18Q96RF0 628 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 KCNS3Q9BQ31 491 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 FUZQ9BT04 418 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 MND1Q9BWT6 205 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 UCK2Q9BZX2 261 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 CXorf36Q9H7Y0 433 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ITM2CQ9NQX7 267 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 DZANK1Q9NVP4 752 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 TAAR2Q9P1P5 351 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 DKK3Q9UBP4 350 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 ACAD8Q9UKU7 415 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
CLTCL1-210ENST00000617926 LRRK1Q38SD2 2015 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 HYKKA2RU49 373 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 FAM172BPA6NC97 362 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 H3BM21 787 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 TPST2O60704 377 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 LILRB5O75023 590 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 LEFTY1O75610 366 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 TGFB1P01137 390 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 GBAP04062 536 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 IL3P08700 152 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 RPS19P39019 145 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 MMP12P39900 470 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 RECQLP46063 649 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 NKX2-5P52952 324 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 PSPHP78330 225 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 MLLT11Q13015 90 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 SMAD2Q15796 467 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 OCLNQ16625 522 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 DUSP7Q16829 419 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 ATAD3CQ5T2N8 411 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 MFSD4BQ5TF39 518 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 TMEM220Q6QAJ8 160 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 SLC7A5P1Q8MH63 180 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 CLIP4Q8N3C7 705 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 KREMEN2Q8NCW0 462 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 CAPSLQ8WWF8 208 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 UBE2E3Q969T4 207 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 COL25A1Q9BXS0 654 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 NLNQ9BYT8 704 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 SPNS1Q9H2V7 528 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 OR51B5Q9H339 312 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 TP63Q9H3D4 680 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 SFXN1Q9H9B4 322 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 ERVK13-1Q9NX77 482 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 SPATA7Q9P0W8 599 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 PLXND1Q9Y4D7 1925 aa12.28□□□□□ -0.44
CLTCL1-210ENST00000617926 BDP1A6H8Y1 2624 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 FAM227AF5H4B4 570 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 MFN2O95140 757 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 LGI1O95970 557 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 KRT8P05787 483 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 DDOSTP39656 456 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 RPS5P46782 204 aaKnown RBP12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 RFX2P48378 723 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 RORCP51449 518 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 COPZ1P61923 177 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 ALDH6A1Q02252 535 aaKnown RBP12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 ZNF91Q05481 1191 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 TP53BP2Q13625 1128 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 SEC23BQ15437 767 aa12.27□□□□□ -0.45
CLTCL1-210ENST00000617926 SPHARQ15513 63 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms