RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MAGEA13PA6NCF6 341 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 OR5K3A6NET4 321 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 KIR2DS3K7RE56 304 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 AQP9O43315 295 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 MITFO75030 526 aaPredicted RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 RPS9P46781 194 aaKnown RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 STXBP1P61764 594 aaKnown RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 CDK6Q00534 326 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 LASP1Q14847 261 aaKnown RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 KIR2DS5Q14953 304 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 PRAMEF17Q5VTA0 474 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 GATAD2AQ86YP4 633 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 ZDHHC13Q8IUH4 622 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 TBC1D19Q8N5T2 526 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 Q8N9G6 341 aaPredicted RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 C11orf65Q8NCR3 313 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 SLC38A5Q8WUX1 472 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 NCSTNQ92542 709 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 TAMM41Q96BW9 452 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 IER2Q9BTL4 223 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 C9orf16Q9BUW7 83 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 ZCCHC3Q9NUD5 404 aaKnown RBP7.36□□□□□ -1.23
NEK3-207ENST00000617054 AASSQ9UDR5 926 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 RAB26Q9ULW5 256 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 NAALAD2Q9Y3Q0 740 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 GPR179Q6PRD1 2367 aa7.36□□□□□ -1.23
NEK3-207ENST00000617054 A8MU76 341 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 DENRO43583 198 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 PRSS23O95084 383 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 RASAL1O95294 804 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MED26O95402 600 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CYP4B1P13584 511 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 UQCRC2P22695 453 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MC3RP41968 323 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SEPHS1P49903 392 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CHN2P52757 468 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 RGS1Q08116 209 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MERTKQ12866 999 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 ELOCQ15369 112 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SYT16Q17RD7 645 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TMEM35AQ53FP2 167 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 GCNT6Q5T4J0 391 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MRM1Q6IN84 353 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 ARMC6Q6NXE6 501 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 KLHL6Q8WZ60 621 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 RERGQ96A58 199 aaPredicted RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 MTERF3Q96E29 417 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 ZBED6CLQ96FA7 236 aaPredicted RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 NELL2Q99435 816 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 ADI1Q9BV57 179 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 PITHD1Q9GZP4 211 aaPredicted RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CACNA1EQ15878 2313 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 HMGN4O00479 90 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SUV39H1O43463 412 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 B4GAT1O43505 415 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 HS6ST1O60243 411 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 FCGR1AP12314 374 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CPN2P22792 545 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 RPL3P39023 403 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 DHPSP49366 369 aaPredicted RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 ARSFP54793 590 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CDH15P55291 814 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 LIM2P55344 173 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR1D5P58170 312 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 KCNJ10P78508 379 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MAT1AQ00266 395 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 GANABQ14697 944 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.35□□□□□ -1.23
NEK3-207ENST00000617054 CMPK2Q5EBM0 449 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SPRED1Q7Z699 444 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TSEN54Q7Z6J9 526 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 OOSP2Q86WS3 158 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 GOLM1Q8NBJ4 401 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR9A4Q8NGU2 314 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR2I1PQ8NGU4 316 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR5P2Q8WZ92 322 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TFAP2CQ92754 450 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CLDN23Q96B33 292 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 ZG16BQ96DA0 208 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TM4SF19Q96DZ7 209 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CCDC3Q9BQI4 270 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 EPS8L2Q9H6S3 715 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 IL1RAPQ9NPH3 570 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 IRAK4Q9NWZ3 460 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 DNAJB9Q9UBS3 223 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SCOCQ9UIL1 159 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CES1P1Q9UKY3 287 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SAMD4AQ9UPU9 718 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 CLCA2Q9UQC9 943 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TESMINQ9Y4I5 508 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TECTAO75443 2155 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 IGHV5-51A0A0C4DH38 117 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 A0A0J9YY10 115 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 BCAT2O15382 392 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms