RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PIK3CBP42338 1070 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MAT1AQ00266 395 aaKnown RBP14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZXDCQ2QGD7 858 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 LIPKQ5VXJ0 399 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CDK20Q8IZL9 346 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SIX5Q8N196 739 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR10H4Q8NGA5 316 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ISG20Q96AZ6 181 aaKnown RBP14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PDLIM5Q96HC4 596 aaKnown RBP14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR2M4Q96R27 311 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 AMBRA1Q9C0C7 1298 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 BRD7Q9NPI1 651 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
TNFRSF11A-206ENST00000617039 WWP2O00308 870 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 AHCYP23526 432 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 RAB28P51157 221 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR6K6Q8NGW6 343 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 EZH1Q92800 747 aaPredicted RBP14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 GPATCH1Q9BRR8 931 aaKnown RBP14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 TMED9Q9BVK6 235 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ANKRD60Q9BZ19 345 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZNF385DQ9H6B1 395 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 RWDD3Q9Y3V2 267 aa14.08□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SGK494L7N484 410 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 TMCC2O75069 709 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 GUCY1B2O75343 617 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 NTN1O95631 604 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ALPLP05186 524 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ZNF888P0CJ79 500 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 BMXP51813 675 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CRISP3P54108 245 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 PRR5P85299 388 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ILF2Q12905 390 aaKnown RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 MSRB3Q8IXL7 192 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SVOPLQ8N434 492 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 LEMD2Q8NC56 503 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 NDNFQ8TB73 568 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 RDH12Q96NR8 316 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 BOLA2-SMG1P6H3BVE0 249 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 GTPBP1O00178 669 aaKnown RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 MOSPD3O75425 235 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 OPN1LWP04000 364 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ANXA11P50995 505 aaKnown RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 DAPP51397 102 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SP140Q13342 867 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CLCA4Q14CN2 919 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 RGS21Q2M5E4 152 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 DEFB133Q30KQ1 61 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ZNF57Q68EA5 555 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 Q6ZS52 159 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 RNF168Q8IYW5 571 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ACOT4Q8N9L9 421 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 HPS1Q92902 700 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 MYDGFQ969H8 173 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 MMABQ96EY8 250 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 APOOQ9BUR5 198 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 DCSTAMPQ9H295 470 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 TBC1D29Q9UFV1 150 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ARHGEF17Q96PE2 2063 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 HCN1O60741 890 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 GYPBP06028 91 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SOX6P35712 828 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SRP54P61011 504 aaKnown RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CDK5R2Q13319 367 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 GINS1Q14691 196 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SLC30A6Q6NXT4 461 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 HACD2Q6Y1H2 254 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 PRR22Q8IZ63 422 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 LNX2Q8N448 690 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ZNF433Q8N7K0 673 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 FAM98AQ8NCA5 519 aaKnown RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 PIK3R3Q92569 461 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CPPED1Q9BRF8 314 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 HDHD2Q9H0R4 259 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CD320Q9NPF0 282 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ANKMY1Q9P2S6 941 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 DOCK9Q9BZ29 2069 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 PLPP1O14494 284 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 FAM111BQ6SJ93 734 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 TMPRSS9Q7Z410 1059 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 IGFN1Q86VF2 1251 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 OXR1Q8N573 874 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 NUP43Q8NFH3 380 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SLC38A4Q969I6 547 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 ZDHHC5Q9C0B5 715 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 USP36Q9P275 1121 aaKnown RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 PSME4Q14997 1843 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 A0A0A6YYC8 382 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 I3L1I5 382 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 AREL1O15033 823 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 SRPRAP08240 638 aaKnown RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 GABRA3P34903 492 aa14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
TNFRSF11A-206ENST00000617039 COPZ1P61923 177 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms