RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ASB15Q8WXK1 588 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 F2RL3Q96RI0 385 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 TBCDQ9BTW9 1192 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 VPS11Q9H270 941 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 MCCC2Q9HCC0 563 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 LYRM4Q9HD34 91 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 HPF1Q9NWY4 346 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 MYOTQ9UBF9 498 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 ITGB1BP2Q9UKP3 347 aa17.58■□□□□ 0.4
CDX1-202ENST00000616154 TRIM49D1C9J1S8 452 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 H0YIV9 168 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 STX16-NPEPL1H3BU86 382 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 STX16O14662 325 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 OR6B1O95007 311 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 IGFBP2P18065 325 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 RIPPLY3P57055 190 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 HSDL2Q6YN16 418 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 ZNF793Q6ZN11 406 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 SH2D5Q6ZV89 423 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 MORN4Q8NDC4 146 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 OR14A16Q8NHC5 309 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 DAZLQ92904 295 aaKnown RBP17.57■□□□□ 0.4
CDX1-202ENST00000616154 RASL10BQ96S79 203 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 COPS7BQ9H9Q2 264 aaPredicted RBP17.57■□□□□ 0.4
CDX1-202ENST00000616154 TMBIM4Q9HC24 238 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 ZNF358Q9NW07 568 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 PSD3Q9NYI0 1048 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 VTI1BQ9UEU0 232 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 CLCA3PQ9Y6N3 262 aa17.57■□□□□ 0.4
CDX1-202ENST00000616154 TLDC2A0PJX2 215 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 PINLYPA6NC86 204 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 SMIM23A6NLE4 172 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 ACOT7O00154 380 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 IFNA16P05015 189 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 ATP5A1P25705 553 aaKnown RBP17.56■□□□□ 0.4
CDX1-202ENST00000616154 CHRNB4P30926 498 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 SOX3P41225 446 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 EMC4Q5J8M3 183 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 DEPDC1Q5TB30 811 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 KHDRBS2Q5VWX1 349 aaKnown RBP17.56■□□□□ 0.4
CDX1-202ENST00000616154 PAOXQ6QHF9 649 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 IL20RBQ6UXL0 311 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 RGS9BPQ6ZS82 235 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 CHSY3Q70JA7 882 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 GOLGA7Q7Z5G4 137 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 CDH24Q86UP0 819 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 TRABD2AQ86V40 505 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 TMEM151AQ8N4L1 468 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 OR2M7Q8NG81 312 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 LILRB4Q8NHJ6 448 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 PTPMT1Q8WUK0 201 aaPredicted RBP17.56■□□□□ 0.4
CDX1-202ENST00000616154 CMTM7Q96FZ5 175 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 DEFB127Q9H1M4 99 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 ZDHHC11Q9H8X9 412 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 LIN28AQ9H9Z2 209 aaKnown RBP17.56■□□□□ 0.4
CDX1-202ENST00000616154 DMRT3Q9NQL9 472 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 XPR1Q9UBH6 696 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 TBK1Q9UHD2 729 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 RNF6Q9Y252 685 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 PCDHGA11Q9Y5H2 935 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 SPG11Q96JI7 2443 aa17.56■□□□□ 0.4
CDX1-202ENST00000616154 LRRC14BA6NHZ5 514 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 WWP2O00308 870 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 PDE9AO76083 593 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 SIX3O95343 332 aaPredicted RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 MYZAPP0CAP1 466 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 HIST1H1TP22492 207 aaPredicted RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 HK2P52789 917 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 PPIAP62937 165 aaKnown RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 PLGLB1Q02325 96 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 TFF3Q07654 80 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 STX4Q12846 297 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 GTF2H2Q13888 395 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 TESK1Q15569 626 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 GTF2H2CQ6P1K8 395 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 LCA5Q86VQ0 697 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 ACOT4Q8N9L9 421 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 OR8K3Q8NH51 312 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 HUS1BQ8NHY5 278 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 ACMSDQ8TDX5 336 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 RND1Q92730 232 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 MRPL57Q9BQC6 102 aaKnown RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 C1QTNF3Q9BXJ4 246 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 ALOXE3Q9BYJ1 711 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 MRPL46Q9H2W6 279 aaKnown RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 NPDC1Q9NQX5 325 aaPredicted RBP17.55■□□□□ 0.4
CDX1-202ENST00000616154 ANGPTL3Q9Y5C1 460 aa17.55■□□□□ 0.4
CDX1-202ENST00000616154 A0A0G2JMM0 328 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 A0A1W2PPB8 328 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 A0A1W2PRS3 328 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 FAM166BA8MTA8 275 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 KIR3DP1A8MWS1 328 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 RGS16O15492 202 aaPredicted RBP17.54■□□□□ 0.4
CDX1-202ENST00000616154 GLSO94925 669 aaPredicted RBP17.54■□□□□ 0.4
CDX1-202ENST00000616154 SBK3P0C264 359 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 NR0B1P51843 470 aaKnown RBP17.54■□□□□ 0.4
CDX1-202ENST00000616154 SERTAD2Q14140 314 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 NDUFAF5Q5TEU4 345 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 RTL4Q6ZR62 310 aa17.54■□□□□ 0.4
CDX1-202ENST00000616154 GK5Q6ZS86 529 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms