RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GLYATL1Q969I3 302 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 BORCS6Q96GS4 357 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM41AQ96HV5 264 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ALKBH4Q9NXW9 302 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LAMB2P55268 1798 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HSPA12AO43301 675 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OAZ2O95190 189 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CFIP05156 583 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CD3GP09693 182 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR12D1P0DN82 309 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GTF2F2P13984 249 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LHCGRP22888 699 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HTR2AP28223 471 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ELK4P28324 431 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CCND3P30281 292 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 AGTR2P50052 363 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ACTBP60709 375 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TBPL1P62380 186 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ACTG1P63261 375 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PLP2Q04941 152 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GINS1Q14691 196 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 IGDCC3Q8IVU1 814 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HERPUD2Q9BSE4 406 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 MROQ9BYG7 248 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ATG5Q9H1Y0 275 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR51B5Q9H339 312 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 XKR8Q9H6D3 395 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM165Q9HC07 324 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CTPS2Q9NRF8 586 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SIX4Q9UIU6 781 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 A8MUA0 341 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 FZD9O00144 591 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ALDOAP04075 364 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ARRB1P49407 418 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ARF3P61204 181 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 ARF1P84077 181 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 AIMP2Q13155 320 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 KIAA0319Q5VV43 1072 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LIPKQ5VXJ0 399 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SLC18B1Q6NT16 456 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 UBQLNLQ8IYU4 475 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR9I1Q8NGQ6 314 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DDIT4LQ96D03 193 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PHB2Q99623 299 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C17orf62Q9BQA9 187 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 URM1Q9BTM9 101 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 RAB9BQ9NP90 201 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SRRDQ9UH36 339 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DNMT3AQ9Y6K1 912 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 A0A0G2JN53 185 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 I3L521 148 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 B4GALT2O60909 372 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CH25HO95992 272 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ADH6P28332 368 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HNF1BP35680 557 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TBRG1Q3YBR2 411 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PNCKQ6P2M8 343 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PRSS48Q7RTY5 328 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CPNE8Q86YQ8 564 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 KRTCAP2Q8N6L1 136 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR6N1Q8NGY5 312 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RPLP0P6Q8NHW5 317 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 LMX1AQ8TE12 382 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 FAM118AQ9NWS6 357 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DUX1O43812 170 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 CREBL2O60519 120 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 SNNO75324 88 aaPredicted RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 FGF18O76093 207 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ASGR2P07307 311 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 H2BFMP0C1H6 154 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 H2AFB2P0C5Z0 115 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PABPC4LP0CB38 370 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 CCL5P13501 91 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RPS3P23396 243 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD9-221ENST00000615216 MAP2K3P46734 347 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 DGKEP52429 567 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HK3P52790 923 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NRLP54845 237 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 UGT3A2Q3SY77 523 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 C6orf141Q5SZD1 244 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 NXPE4Q6UWF7 544 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 UGT2A3Q6UWM9 527 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ZER1Q7Z7L7 766 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SCML4Q8N228 414 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RTP4Q96DX8 246 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PHOX2BQ99453 314 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 HERC2P3Q9BVR0 1158 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 ACSL6Q9UKU0 697 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TMEM98Q9Y2Y6 226 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 COCHO43405 550 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SPARCP09486 303 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 SLC35E2BP0CK96 405 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RNH1P13489 461 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 AMY2BP19961 511 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 RORAP35398 523 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms