RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GNMTQ14749 295 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 UNC50Q53HI1 259 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 UGT2A3Q6UWM9 527 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 MS4A15Q8N5U1 240 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 BORCS8Q96FH0 119 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 MROQ9BYG7 248 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 NPC1O15118 1278 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 IFNA1P01562 189 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 HRGP04196 525 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 DHPSP49366 369 aaPredicted RBP16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 CLDN8P56748 225 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 CHRFAM7AQ494W8 412 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 MANEALQ5VSG8 457 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 ELMOD2Q8IZ81 293 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 OR51G2Q8NGK0 314 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 TMEM246Q9BRR3 403 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 MTG2Q9H4K7 406 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 TAS2R8Q9NYW2 309 aa16.7■□□□□ 0.26
HMGXB3-206ENST00000613459 SMAD9O15198 467 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 HSD17B1P14061 328 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 DNASE1P24855 282 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ARL6IP1Q15041 203 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 BLOC1S3Q6QNY0 202 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 TMEM135Q86UB9 458 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ZNF283Q8N7M2 679 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 BORCS6Q96GS4 357 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 C17orf62Q9BQA9 187 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 POLE4Q9NR33 117 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 DHDHQ9UQ10 334 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 CFIP05156 583 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 HEXBP07686 556 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 H2BFMP0C1H6 154 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 PNCKQ6P2M8 343 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ASRGL1Q7L266 308 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 PLD6Q8N2A8 252 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 NUP43Q8NFH3 380 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 GATAD2BQ8WXI9 593 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 MRGPRX2Q96LB1 330 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 PSAT1Q9Y617 370 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 EIF1AYO14602 144 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 NARSO43776 548 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 CD9P21926 228 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 EIF1AXP47813 144 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 EXOC3L2Q2M3D2 409 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 TMEM69Q5SWH9 247 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 PHF19Q5T6S3 580 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 C3P1Q6ZMU1 363 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 IGDCC3Q8IVU1 814 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 LMX1AQ8TE12 382 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ZNF559Q9BR84 538 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ADAMTS6Q9UKP5 1117 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 EDARQ9UNE0 448 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 S1PR4O95977 384 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 HK3P52790 923 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 GBX1Q14549 363 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 KIF18BQ86Y91 864 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 ZNF689Q96CS4 500 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 TMEM185BQ9H7F4 350 aa16.69■□□□□ 0.26
HMGXB3-206ENST00000613459 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 PCDH17O14917 1159 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 ADAP00813 363 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 KANK2Q63ZY3 851 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 UNQ6126/PRO20091Q6UXV3 157 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 LRRC25Q8N386 305 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 ZFP57Q9NU63 452 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 AP1M2Q9Y6Q5 423 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 KHNYNO15037 678 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 OAZ2O95190 189 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 C8orf89P0DMQ9 161 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 CCL14Q16627 93 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 METTL2BQ6P1Q9 378 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 METTL25Q8N6Q8 603 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 WDR92Q96MX6 357 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 CERS4Q9HA82 394 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 FBRSQ9HAH7 460 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 CACNG4Q9UBN1 327 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 FBXL3Q9UKT7 428 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 TMEM98Q9Y2Y6 226 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 FZD9O00144 591 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 EDNRBP24530 442 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 CCINQ13939 588 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 RHCGQ9UBD6 479 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 MGAT4CQ9UBM8 478 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 CFAP20Q9Y6A4 193 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 PTTG1O95997 202 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 ACRP10323 421 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 PGCP20142 388 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 HNF1BP35680 557 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 DIO3P55073 304 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 LIPKQ5VXJ0 399 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 GTF2IRD2BQ6EKJ0 949 aa16.68■□□□□ 0.26
HMGXB3-206ENST00000613459 GTF2IRD2Q86UP8 949 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms