RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MYO1GB0I1T2 1018 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 YKT6O15498 198 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 HCRTR1O43613 425 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 DUX1O43812 170 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 KIF1CO43896 1103 aaKnown RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 GALR3O60755 368 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 PRKRAO75569 313 aaKnown RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ERAL1O75616 437 aaKnown RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 TIPRLO75663 272 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ZBTB11O95625 1053 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 CAPNS1P04632 268 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ALPPL2P10696 532 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 IL1RNP18510 177 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 CSNK2A2P19784 350 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 CPN2P22792 545 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 FASP25445 335 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 PEX2P28328 305 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 LIM2P55344 173 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 GFERP55789 205 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 OR1D5P58170 312 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SNRPNP63162 240 aaKnown RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 HSPB3Q12988 150 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SPIDRQ14159 915 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 CEBPEQ15744 281 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 LRRC36Q1X8D7 754 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 PRTGQ2VWP7 1150 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 HLA-BQ31612 363 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF528Q3MIS6 628 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 NKAIN2Q5VXU1 208 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SAXO2Q658L1 398 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 KANSL1Q7Z3B3 1105 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 RNF130Q86XS8 419 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SAMD14Q8IZD0 417 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 EID3Q8N140 333 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 C11orf65Q8NCR3 313 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 OR5AK3PQ8NH89 298 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 KLHL6Q8WZ60 621 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 NEURL3Q96EH8 262 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 RNF145Q96MT1 663 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SEPHS2Q99611 448 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF184Q99676 751 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 DPH2Q9BQC3 489 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 NPLQ9BXD5 320 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 GLIPR2Q9H4G4 154 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 EPS8L2Q9H6S3 715 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 YY1AP1Q9H869 796 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 PDE7BQ9NP56 450 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 AGPAT4Q9NRZ5 378 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 PADI4Q9UM07 663 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 DAPP1Q9UN19 280 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 FAF1Q9UNN5 650 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ENTPD4Q9Y227 616 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF780BQ9Y6R6 833 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 SPACA6W5XKT8 324 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 RP1P56715 2156 aa8.41□□□□□ -1.06
CCDC47-207ENST00000612558 B4GAT1O43505 415 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SERPINA1P01009 418 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 CFIP05156 583 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 RAP2AP10114 183 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 PNLIPP16233 465 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 KDELR2P33947 212 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 MPIP34949 423 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 GABRA4P48169 554 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 CCT3P49368 545 aaKnown RBP8.4□□□□□ -1.06
CCDC47-207ENST00000612558 PRIM2P49643 509 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 NCBP2P52298 156 aaKnown RBP eCLIP8.4□□□□□ -1.06
CCDC47-207ENST00000612558 TNFRSF17Q02223 184 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 RBBP4Q09028 425 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 C16orf72Q14CZ0 275 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 TAF11Q15544 211 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 NDUFA9Q16795 377 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 DEFB110Q30KQ9 67 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 GRAMD1BQ3KR37 738 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SPDYE7PQ495Y7 208 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 COX20Q5RI15 118 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 GCNT6Q5T4J0 391 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 OR52E8Q6IFG1 317 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 HMBOX1Q6NT76 420 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 NIPAL1Q6NVV3 410 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 IZUMO2Q6UXV1 221 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 AMIGO2Q86SJ2 522 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 PLXDC1Q8IUK5 500 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 OR6C4Q8NGE1 309 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 OR4C6Q8NH72 309 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 FBXO30Q8TB52 745 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 FAM110BQ8TC76 370 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SAP25Q8TEE9 199 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 CNRIP1Q96F85 164 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF285Q96NJ3 590 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 CHID1Q9BWS9 393 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM38AQ9H6F2 299 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 MAGIXQ9H6Y5 334 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 ANKHQ9HCJ1 492 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 STARD5Q9NSY2 213 aa8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SIRT3Q9NTG7 399 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-207ENST00000612558 SOHLH2Q9NX45 425 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms