RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 GSTM3P21266 225 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SLC9A3P48764 834 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SMSP52788 366 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TRAM2Q15035 370 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 ZSWIM7Q19AV6 140 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TCTN1Q2MV58 587 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 COLEC12Q5KU26 742 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SHQ1Q6PI26 577 aaKnown RBP6.93□□□□□ -1.3
CSDE1-218ENST00000610726 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 NUP54Q7Z3B4 507 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 PLXDC1Q8IUK5 500 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 HS3ST5Q8IZT8 346 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR52P1PQ8NH57 321 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 OR5K2Q8NHB8 316 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 GTF2H4Q92759 462 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 FEVQ99581 238 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 SLC29A1Q99808 456 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 USP22Q9UPT9 525 aa6.93□□□□□ -1.3
CSDE1-218ENST00000610726 GPR89AB7ZAQ6 455 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 LOC110117498-PIK3R3F6TDL0 507 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 TAPBPO15533 448 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 HCRTR2O43614 444 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CPNE3O75131 537 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CSTAP01040 98 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 JMJD7P0C870 316 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 GPR89BP0CG08 455 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MC3RP41968 323 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CLCN2P51788 898 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 DCDC1P59894 354 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 GINS1Q14691 196 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 GRM7Q14831 915 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 INAVAQ3KP66 663 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 WDR53Q7Z5U6 358 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 OR2L5Q8NG80 312 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 OR5D16Q8NGK9 328 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 BBS10Q8TAM1 723 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MKRN2Q9H000 416 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 TUBB1Q9H4B7 451 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 OBP2AQ9NY56 170 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 STMN3Q9NZ72 180 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 TAAR2Q9P1P5 351 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 FTSJ1Q9UET6 329 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 LIPT1Q9Y234 373 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ASB1Q9Y576 335 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 POM121BA6NF01 834 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ANTXRLA6NF34 631 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 LDB3O75112 727 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RCBTB2O95199 551 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ACVR2AP27037 513 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 METAP1P53582 386 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RPP38P78345 283 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF33BQ06732 778 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 KIR2DS3Q14952 304 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 NSDHLQ15738 373 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CNPY1Q3B7I2 92 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SLC36A3Q495N2 470 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 KLHL22Q53GT1 634 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RNASE12Q5GAN4 147 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RBM48Q5RL73 367 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 C11orf88Q6PI97 169 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 OR9A2Q8NGT5 310 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MOSPD2Q8NHP6 518 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RIT1Q92963 219 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MOAP1Q96BY2 351 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 PIP5K1AQ99755 562 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MAPKAP1Q9BPZ7 522 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 HDAC8Q9BY41 377 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 FGF22Q9HCT0 170 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SMOXQ9NWM0 555 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 HCN2Q9UL51 889 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SGK494L7N484 410 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 TFECO14948 347 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 FRS3O43559 492 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SCO2O43819 266 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 MITFO75030 526 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 HMGN2P05204 90 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 DDCP20711 480 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CDH11P55287 796 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SELPLGQ14242 412 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CEP78Q5JTW2 689 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ZC3H14Q6PJT7 736 aaKnown RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SLCO4C1Q6ZQN7 724 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 IKBIPQ70UQ0 350 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RAB2BQ8WUD1 216 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 KLHL6Q8WZ60 621 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 HSPBAP1Q96EW2 488 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 COQ7Q99807 217 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 CRISPLD2Q9H0B8 497 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 RACGAP1Q9H0H5 632 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 METTL7AQ9H8H3 244 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 ZBTB20Q9HC78 741 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-218ENST00000610726 BRD7Q9NPI1 651 aa6.92□□□□□ -1.3
CSDE1-218ENST00000610726 SNTG1Q9NSN8 517 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms