RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PIGVQ9NUD9 493 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TECRQ9NZ01 308 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TRMT6Q9UJA5 497 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 MOSPD1Q9UJG1 213 aa3.52□□□□□ -1.85
SMCHD1-213ENST00000609587 TRBV2A0A0J9YWF9 115 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 SH3PXD2BA1X283 911 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 YJEFN3A6XGL0 299 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 NEDD8-MDP1E9PL57 170 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 FBP2O00757 339 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ANXA9O76027 345 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 TXNDC12O95881 172 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 FHP07954 510 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CCDC159P0C7I6 412 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 STMN1P16949 149 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PPP2R1AP30153 589 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CASQ1P31415 396 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ALDH3B1P43353 468 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CD151P48509 253 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 NDUFV3P56181 108 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 RPS27AP62979 156 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 MS4A2Q01362 244 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PAX8Q06710 450 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PPP1R8Q12972 351 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 MSLNQ13421 630 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 RAPSNQ13702 412 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC17A1Q14916 467 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ZKSCAN8Q15776 578 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 MPPE1Q53F39 396 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 TEX35Q5T0J7 233 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF772Q68DY9 489 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 RTL6Q6ICC9 239 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PAQR6Q6TCH4 344 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 Q6ZRG5 221 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 RABEPKQ7Z6M1 372 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 BANPQ8N9N5 519 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF485Q8NCK3 441 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 NEK11Q8NG66 645 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PCNPQ8WW12 178 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 N4BP2L2Q92802 583 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ESAMQ96AP7 390 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 MRPL53Q96EL3 112 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CFAP53Q96M91 514 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 SPATA13Q96N96 652 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 ANKRD27Q96NW4 1050 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 FUNDC2Q9BWH2 189 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 EGLN1Q9GZT9 426 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC26A1Q9H2B4 701 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CXXC4Q9H2H0 198 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 DPEP3Q9H4B8 488 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 MOB1AQ9H8S9 216 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 SP140LQ9H930 580 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 PANK3Q9H999 370 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 DEPPQ9NTK1 212 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 HOXC10Q9NYD6 342 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 THYN1Q9P016 225 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 CTSZQ9UBR2 303 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 TSPAN16Q9UKR8 245 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 BLOC1S6Q9UL45 172 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 RABL2BQ9UNT1 228 aa3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 NIP7Q9Y221 180 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 DHX29Q7Z478 1369 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-213ENST00000609587 TRGV8A0A0C4DH27 118 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 TRBV5-4A0A0C4DH59 114 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 A0A1B0GU03 582 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 LOC390937A0A1W2PQ73 354 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 IGLON5A6NGN9 336 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 CCDC69A6NI79 296 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 EEF2KO00418 725 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 BCAS2O75934 225 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 BBOX1O75936 387 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 CXCL14O95715 111 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 SERPINF2P08697 491 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 ATP4BP51164 291 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 CNN1P51911 297 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 RIDAP52758 137 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 HSD17B7P56937 341 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 YBEYP58557 167 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 RPL27P61353 136 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 FASTKQ14296 549 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 EPC2Q52LR7 807 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 MUC21Q5SSG8 566 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 DCAF12Q5T6F0 453 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 PRAMEF7Q5VXH5 474 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 CATSPER3Q86XQ3 398 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 PARP8Q8N3A8 854 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 GVQW1Q8N7I0 195 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 MAPK1IP1LQ8NDC0 245 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 ICA1LQ8NDH6 482 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 URGCPQ8TCY9 931 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 SSC4DQ8WTU2 575 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 NABP1Q96AH0 204 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 RPGRIP1Q96KN7 1286 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF597Q96LX8 424 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 RCHY1Q96PM5 261 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 TAAR6Q96RI8 345 aa3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-213ENST00000609587 ATF6BQ99941 703 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms