RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 STRCQ7RTU9 1775 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SSC5DA1L4H1 1573 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF646O15015 1829 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MGAMO43451 1857 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 BRCA1P38398 1863 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 LY75O60449 1722 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 COL2A1P02458 1487 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 TSC2P49815 1807 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A096LPI6 279 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LOC100506127A0A0U1RQW1 187 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LOC285095A0A1B0GVY8 99 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 E2F8A0AVK6 867 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 UBA6A0AVT1 1052 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PIPSLA2A3N6 862 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 HYKKA2RU49 373 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 NEMP2A6NFY4 417 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CBX4O00257 560 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 WRBO00258 174 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DCLK1O15075 740 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SMAD7O15105 426 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SSX5O60225 188 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLOD3O60568 738 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 EIF1BO60739 113 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MITFO75030 526 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATP6AP2O75787 350 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANXA9O76027 345 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RECKO95980 971 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 KNG1P01042 644 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PTHP01270 115 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MT-ND1P03886 318 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ITGB1P05556 798 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 STSP08842 583 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXC6P09630 235 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SMIM6P0DI80 62 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SULT1A3P0DMM9 295 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SULT1A4P0DMN0 295 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SFTPCP11686 197 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 IFI30P13284 250 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANXA8P13928 327 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MTHFD2P13995 350 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CD19P15391 556 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF3P17036 446 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SPI1P17947 270 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CR2P20023 1033 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 WARSP23381 471 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PSMA3P25788 255 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 STOMP27105 288 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 C21orf33P30042 268 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FGF9P31371 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SDC2P34741 201 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADRA1AP35348 466 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADRA1BP35368 520 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 EIF1P41567 113 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 TGM4P49221 684 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CENPAP49450 140 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 STARP49675 285 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 VEGFCP49767 419 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLCN4P51793 760 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARHGDIBP52566 201 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 EPHA5P54756 1037 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DIO3P55073 304 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SNRPGP62308 76 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FKBP1AP62942 108 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CREMQ03060 361 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FGL1Q08830 312 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ST3GAL4Q11206 333 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CSTF3Q12996 717 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LCP2Q13094 533 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 TP53BP2Q13625 1128 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SIM2Q14190 667 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CSHL1Q14406 222 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 VEPH1Q14D04 833 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZMYND11Q15326 602 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SSX1Q16384 188 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 UGCGQ16739 394 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 AP5B1Q2VPB7 878 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF699Q32M78 642 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARHGAP15Q53QZ3 475 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 INO80DQ53TQ3 878 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 XKR3Q5GH77 459 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF667Q5HYK9 610 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM209BQ5JX69 171 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC25A30Q5SVS4 291 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 HES5Q5TA89 166 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 DDI2Q5TDH0 399 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKS6Q68DC2 871 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 PLAG1Q6DJT9 500 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLEC6AQ6EIG7 209 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ESRP1Q6NXG1 681 aaKnown RBP3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCYL2Q6P3W7 929 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM131AQ6UXB0 335 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF730Q6ZMV8 503 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARHGAP36Q6ZRI8 547 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 MSANTD1Q6ZTZ1 278 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 BRINP3Q76B58 766 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 RHOUQ7L0Q8 258 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADGRD2Q7Z7M1 963 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 SERPINA11Q86U17 422 aa3.87□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRTM3Q86VH5 581 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms