RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 DLGAP3O95886 979 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 OSMP13725 252 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 ELAVL4P26378 380 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 PRKCDQ05655 676 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 SELENBP1Q13228 472 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 SPDYE7PQ495Y7 208 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 DCST1Q5T197 706 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 C19orf48Q6RUI8 117 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 ZNF765Q7L2R6 523 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 AMZ2Q86W34 360 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 TMIEQ8NEW7 156 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 C9orf43Q8TAL5 461 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 BADQ92934 168 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 UCK2Q9BZX2 261 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 RHBGQ9H310 441 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 SERHL2Q9H4I8 314 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC25A19Q9HC21 320 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 CPNE5Q9HCH3 593 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 CCDC59Q9P031 241 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 ENOPH1Q9UHY7 261 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-209ENST00000604247 TRPM6Q9BX84 2022 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 PRAMEF27A3QJZ7 478 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 VEGFDO43915 354 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 TPST2O60704 377 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 FGBP02675 491 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 MYOGP15173 224 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 PTGER1P34995 402 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SOX3P41225 446 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 TPTEP56180 551 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 PIN1Q13526 163 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SYPL1Q16563 259 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SZRD1Q7Z422 152 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 COMTD1Q86VU5 262 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 DCUN1D3Q8IWE4 304 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC30A8Q8IWU4 369 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 OR5D16Q8NGK9 328 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 WFIKKN2Q8TEU8 576 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 OTUB1Q96FW1 271 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 AIF1LQ9BQI0 150 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 MVB12BQ9H7P6 319 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC27A6Q9Y2P4 619 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 LCMT2O60294 686 aaKnown RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 ADAP00813 363 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 OR12D1P0DN82 309 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 CCT3P49368 545 aaKnown RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 ILKQ13418 452 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 ETFBKMTQ8IXQ9 262 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC34A3Q8N130 599 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC7A13Q8TCU3 470 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 SMPDL3AQ92484 453 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 OPALINQ96PE5 141 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 TAPBPLQ9BX59 468 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 NUAK2Q9H093 628 aa12.31□□□□□ -0.44
SRGAP2-209ENST00000604247 HEPACAM2A8MVW5 462 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 STATHP02808 62 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 H1F0P07305 194 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 KCNJ5P48544 419 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 TARDBPQ13148 414 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 ELAVL3Q14576 367 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 ZNF234Q14588 700 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 TMEM240Q5SV17 173 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 ERN2Q76MJ5 926 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 UBE3DQ7Z6J8 389 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 CACUL1Q86Y37 369 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 TCEANCQ8N8B7 351 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 PSD4Q8NDX1 1056 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 XAGE5Q8WWM1 108 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 TREX2Q9BQ50 279 aaPredicted RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 MENTQ9BUN1 341 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 HHATLQ9HCP6 504 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 EXOSC4Q9NPD3 245 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 FZD3Q9NPG1 666 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 SEMA3GQ9NS98 782 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 SEC14L3Q9UDX4 400 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 PCDHGB6Q9Y5F9 930 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 PEX16Q9Y5Y5 336 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 EDDM13A0A1B0GTR0 161 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 WWP2O00308 870 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 HAT1O14929 419 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 OR1F1O43749 312 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 SLC28A2O43868 658 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 SEMA3DO95025 777 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 MED26O95402 600 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 ADH1CP00326 375 aa12.3□□□□□ -0.44
SRGAP2-209ENST00000604247 SERPIND1P05546 499 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms