RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SLC9A5Q14940 896 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 DPY19L1Q2PZI1 675 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM71Q6P5X7 295 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 CLEC4FQ8N1N0 589 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 METTL27Q8N6F8 245 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 SRFBP1Q8NEF9 429 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 OR9A4Q8NGU2 314 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ADI1Q9BV57 179 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 KCNH6Q9H252 994 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ALG2Q9H553 416 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF768Q9H5H4 540 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 MIEF1Q9NQG6 463 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 SEMA4GQ9NTN9 838 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 PCDHGB2Q9Y5G2 931 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 IGHV5-10-1A0A0J9YXX1 117 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM150CB9EJG8 249 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 PGRMC2O15173 223 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ACOX3O15254 700 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ZSCAN9O15535 394 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 TPST1O60507 370 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 GALR3O60755 368 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 RDH16O75452 317 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 RASAL1O95294 804 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 FCGR1AP12314 374 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 PTGER1P34995 402 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 EEFSECP57772 596 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 MERTKQ12866 999 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 SLC14A1Q13336 389 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 GAB1Q13480 694 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 SUZ12Q15022 739 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF750Q32MQ0 723 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 ABHD13Q7L211 337 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 B3GNT8Q7Z7M8 397 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 C10orf111Q8N326 155 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 D2HGDHQ8N465 521 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 PAPD5Q8NDF8 572 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 OR1L3Q8NH93 324 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 RHBDD1Q8TEB9 315 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 EXOSC8Q96B26 276 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 CGREF1Q99674 301 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 KCTD14Q9BQ13 255 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 CHRNA10Q9GZZ6 450 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 C8orf4Q9NR00 106 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 TUBA8Q9NY65 449 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 KCMF1Q9P0J7 381 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 HCN4Q9Y3Q4 1203 aa16.38■□□□□ 0.21
PPFIA3-207ENST00000602716 A0A0A6YYC8 382 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 I3L1I5 382 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 FLRT2O43155 660 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 FOXS1O43638 330 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 LDOC1O95751 146 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 TSFMP43897 325 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 ARFIP1P53367 373 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 CDH15P55291 814 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 DUSP2Q05923 314 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 TGM3Q08188 693 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 SQSTM1Q13501 440 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 CYP51A1Q16850 503 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 SLC36A3Q495N2 470 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 ZNF655Q8N720 491 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 TNIP2Q8NFZ5 429 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 FAM120CQ9NX05 1096 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 OAZ3Q9UMX2 235 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
PPFIA3-207ENST00000602716 SCN3AQ9NY46 2000 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TRIM64A6NGJ6 449 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 KCNH1O95259 989 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 CPSF4O95639 269 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 C6orf47O95873 294 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 ARL4DP49703 201 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 HNRNPFP52597 415 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 PDX1P52945 283 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 LIM2P55344 173 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TMTC4Q5T4D3 741 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 NANOGP8Q6NSW7 305 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 ERI1Q8IV48 349 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM52Q8NDY8 209 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 STARD8Q92502 1023 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 ITCHQ96J02 903 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 SERINC2Q96SA4 455 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TMEM121BQ9BXQ6 578 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 NANOGQ9H9S0 305 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 SLC22A7Q9Y694 548 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 UNC13CQ8NB66 2214 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 A0A087WXM4 84 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 D6RAR5 112 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 RFXANKO14593 260 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 PROM1O43490 865 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 GDF9O60383 454 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 SRPX2O60687 465 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 CDK4P11802 303 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 NCK1P16333 377 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 TRA2BP62995 288 aaKnown RBP16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 HEPACAMQ14CZ8 416 aa16.36■□□□□ 0.21
PPFIA3-207ENST00000602716 FXNQ16595 210 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms