RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 KCNJ5P48544 419 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 SNRPGP62308 76 aaKnown RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 LRRC26Q2I0M4 334 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 SPANXN2Q5MJ10 180 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 ERN2Q76MJ5 926 aaKnown RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 WDR53Q7Z5U6 358 aaPredicted RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 CACTIN-AS1Q8N1I8 211 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 OR5K2Q8NHB8 316 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 RSPRY1Q96DX4 576 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 TRNT1Q96Q11 434 aaKnown RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 KCNS3Q9BQ31 491 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 HHATLQ9HCP6 504 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 TEX10Q9NXF1 929 aaPredicted RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 SEC14L3Q9UDX4 400 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 NDOR1Q9UHB4 597 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 WDR37Q9Y2I8 494 aa13.72□□□□□ -0.21
SMG9-211ENST00000601170 WBP11Q9Y2W2 641 aaKnown RBP13.72□□□□□ -0.21
SMG9-211ENST00000601170 MUC22E2RYF6 1773 aaPredicted RBP13.71□□□□□ -0.21
SMG9-211ENST00000601170 MYO7AQ13402 2215 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 H7BY64 318 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 TMPRSS11DO60235 418 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 SCG5P05408 212 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 CKMT1AP12532 417 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 CXCR2P25025 360 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 ETV6P41212 452 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.21
SMG9-211ENST00000601170 CCR8P51685 355 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 XKP51811 444 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 RHAGQ02094 409 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 TMEM52BQ4KMG9 183 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 C12orf73Q69YU5 71 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 PGBD2Q6P3X8 592 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 NUDT13Q86X67 352 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 SLC34A3Q8N130 599 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 CELF5Q8N6W0 485 aaKnown RBP13.71□□□□□ -0.21
SMG9-211ENST00000601170 CXorf40AQ8TE69 158 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 TXNDC15Q96J42 360 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 PRAP1Q96NZ9 151 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 SERHL2Q9H4I8 314 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 EXOSC4Q9NPD3 245 aaKnown RBP13.71□□□□□ -0.21
SMG9-211ENST00000601170 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 TM7SF3Q9NS93 570 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 CLEC2DQ9UHP7 191 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
SMG9-211ENST00000601170 LSM2Q9Y333 95 aaKnown RBP13.71□□□□□ -0.21
SMG9-211ENST00000601170 C5orf42Q9H799 3197 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 PNMA8CA0A1B0GUJ8 204 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CTDSP2O14595 271 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 SNPHO15079 494 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 SLC28A2O43868 658 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CSO75390 466 aaKnown RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 CSTF2P33240 577 aaKnown RBP eCLIP13.71□□□□□ -0.22
SMG9-211ENST00000601170 CTNNB1P35222 781 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 SOX3P41225 446 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CCT3P49368 545 aaKnown RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 VEGFBP49765 207 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 RPA4Q13156 261 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 SYPL1Q16563 259 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 DESI1Q6ICB0 168 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CASP12Q6UXS9 341 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 SZRD1Q7Z422 152 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CCDC190Q86UF4 302 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 MMAAQ8IVH4 418 aaKnown RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 UCN3Q969E3 161 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 TMEM80Q96HE8 168 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 COX14Q96I36 57 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 ZNF607Q96SK3 696 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 POLR2J3Q9H1A7 115 aaKnown RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.22
SMG9-211ENST00000601170 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 GPC6Q9Y625 555 aaPredicted RBP13.71□□□□□ -0.22
SMG9-211ENST00000601170 PRAMEF27A3QJZ7 478 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 NDUFS4O43181 175 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 VIPR2P41587 438 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 REEP5Q00765 189 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMG9-211ENST00000601170 TARDBPQ13148 414 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMG9-211ENST00000601170 ARHGAP19Q14CB8 494 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
SMG9-211ENST00000601170 TCEANCQ8N8B7 351 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 OR5D16Q8NGK9 328 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 SLC7A13Q8TCU3 470 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 RASSF5Q8WWW0 418 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 SLC6A18Q96N87 628 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 QRFPRQ96P65 431 aa13.7□□□□□ -0.22
SMG9-211ENST00000601170 TEFMQ96QE5 360 aaKnown RBP13.7□□□□□ -0.22
SMG9-211ENST00000601170 TREX2Q9BQ50 279 aaPredicted RBP13.7□□□□□ -0.22
SMG9-211ENST00000601170 MENTQ9BUN1 341 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms