RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 SERPINB5P36952 375 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 RAE1P78406 368 aaKnown RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 BTKQ06187 659 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 TUBA3CQ13748 450 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 ARL13AQ5H913 290 aaPredicted RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 CLEC6AQ6EIG7 209 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 RPUSD3Q6P087 351 aaKnown RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 TUBA3EQ6PEY2 450 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 HSDL2Q6YN16 418 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 ATCAYQ86WG3 371 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 HOMEZQ8IX15 550 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 OR4K14Q8NGD5 310 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 THAP3Q8WTV1 239 aaPredicted RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 PPWD1Q96BP3 646 aaKnown RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 APIPQ96GX9 242 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 ART5Q96L15 291 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 FAIM2Q9BWQ8 316 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 SIRT5Q9NXA8 310 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 COPS7AQ9UBW8 275 aa15.69■□□□□ 0.1
TRIM28-215ENST00000601150 COPG1Q9Y678 874 aaKnown RBP15.69■□□□□ 0.1
TRIM28-215ENST00000601150 GNG14A0A1W2PPG7 69 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 CHEK2O96017 543 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 CHRNGP07510 517 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 FGF4P08620 206 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 SLC35E2P0CK97 266 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 TIA1P31483 386 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIM28-215ENST00000601150 GALNSP34059 522 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 CD96P40200 585 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 SERPINB4P48594 390 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 OC90Q02509 493 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-215ENST00000601150 SLC48A1Q6P1K1 146 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 GALNT18Q6P9A2 607 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 DGAT2L6Q6ZPD8 337 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 ZCCHC23Q6ZST2 131 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 NUDCD3Q8IVD9 361 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 HORMAD2Q8N7B1 307 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF321PQ8N8H1 164 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF721Q8TF20 911 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 C11orf24Q96F05 449 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-215ENST00000601150 SENP5Q96HI0 755 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-215ENST00000601150 FBXL20Q96IG2 436 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 ASF1BQ9NVP2 202 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 ANKRD10Q9NXR5 420 aa15.68■□□□□ 0.1
TRIM28-215ENST00000601150 SLC28A1O00337 649 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 PRKNO60260 465 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-215ENST00000601150 RSL1D1O76021 490 aaKnown RBP15.67■□□□□ 0.1
TRIM28-215ENST00000601150 ZWINTO95229 277 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 TRHRP34981 398 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-215ENST00000601150 GSTM5P46439 218 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 ST13P50502 369 aaKnown RBP15.67■□□□□ 0.1
TRIM28-215ENST00000601150 OR1C1Q15619 314 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 INAQ16352 499 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 SPRED3Q2MJR0 410 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 KANK2Q63ZY3 851 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 RNF165Q6ZSG1 346 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 MMP21Q8N119 569 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 GALNT11Q8NCW6 608 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 MDS2Q8NDY4 140 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 OR8K3Q8NH51 312 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 PPP1R14CQ8TAE6 165 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 RIT1Q92963 219 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 C19orf60Q96EN9 201 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 SIGLEC12Q96PQ1 595 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 KCNK9Q9NPC2 374 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 AGPAT4Q9NRZ5 378 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.67■□□□□ 0.17e-7■□□□□ 8.2
TRIM28-215ENST00000601150 LRFN1Q9P244 771 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 CES1P1Q9UKY3 287 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 PSME2Q9UL46 239 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 DLGAP4Q9Y2H0 992 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 NTNG1Q9Y2I2 539 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 FIS1Q9Y3D6 152 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 TRAF6Q9Y4K3 522 aa15.67■□□□□ 0.1
TRIM28-215ENST00000601150 PRRC2CQ9Y520 2896 aaKnown RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 BIRC5O15392 142 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 RGS14O43566 566 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 VPS4BO75351 444 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ITGA10O75578 1167 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 IGKV3-11P04433 115 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 IL3P08700 152 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ANXA4P09525 319 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CPMP14384 443 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 DRD2P14416 443 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CD46P15529 392 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 PORP16435 677 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ALDH9A1P49189 494 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CYB561P49447 251 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 HLCSP50747 726 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 XKP51811 444 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ERVK-8P63133 956 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 RNF4P78317 190 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 KCNC4Q03721 635 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF267Q14586 743 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CASP8Q14790 479 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF766Q5HY98 468 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CLYBLQ8N0X4 340 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 OR5L2Q8NGL0 311 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 OR6Y1Q8NGX8 325 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 FAM76AQ8TAV0 307 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms