RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PLPP5Q8NEB5 264 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 OR2Y1Q8NGV0 311 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 VPS33AQ96AX1 596 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 SPDL1Q96EA4 605 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 ZNF681Q96N22 645 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 GPR87Q9BY21 358 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 ALOXE3Q9BYJ1 711 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 GIMAP4Q9NUV9 329 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 TCFL5Q9UL49 500 aa19.19■□□□□ 0.66
PNKP-215ENST00000600910 UMODP07911 640 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 CAPN3P20807 821 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 EFNA1P20827 205 aaPredicted RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 FOLR3P41439 243 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 WNT3P56703 355 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 PCBP4P57723 403 aaKnown RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 IGLV3-21P80748 117 aaPredicted RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 DUSP2Q05923 314 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 TERF2Q15554 542 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 NSDHLQ15738 373 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 CEBPEQ15744 281 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 VPS26BQ4G0F5 336 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 FAAH2Q6GMR7 532 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 OR52E6Q96RD3 313 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 BBS4Q96RK4 519 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 SLAMF7Q9NQ25 335 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 SLC52A3Q9NQ40 469 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 WDR70Q9NW82 654 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 CCDC154A6NI56 674 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 CAPN14A8MX76 684 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 MYO1GB0I1T2 1018 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 ALOX12BO75342 701 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 SNRPB2P08579 225 aaKnown RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 CPMP14384 443 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 PORP16435 677 aaPredicted RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 PTPN4P29074 926 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 NTSP30990 170 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 CCDC116Q8IYX3 515 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 SAMD14Q8IZD0 417 aaPredicted RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 LRRC25Q8N386 305 aaPredicted RBP19.18■□□□□ 0.66
PNKP-215ENST00000600910 NATD1Q8N6N6 113 aa19.18■□□□□ 0.66
PNKP-215ENST00000600910 LOC100653049A0A140TA62 436 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 TCRBV16S1A1N1A0A5B0 115 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 KRT34O76011 436 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 CSNK2A2P19784 350 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 FRKP42685 505 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 SERTAD2Q14140 314 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 MAPRE2Q15555 327 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 FAM91A1Q658Y4 838 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 LANCL3Q6ZV70 420 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 TRPM8Q7Z2W7 1104 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 ANKRD46Q86W74 232 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 SNX32Q86XE0 403 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 POU5F2Q8N7G0 328 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 SUN3Q8TAQ9 357 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 METTL21AQ8WXB1 218 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 FGF11Q92914 225 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 KIAA1143Q96AT1 154 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 ZBED6CLQ96FA7 236 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 FAM117AQ9C073 453 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 GPN2Q9H9Y4 310 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 FAM120CQ9NX05 1096 aaKnown RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.17■□□□□ 0.66
PNKP-215ENST00000600910 KCND3Q9UK17 655 aa19.17■□□□□ 0.66
PNKP-215ENST00000600910 A0A1W2PRB8 838 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 RNASET2O00584 256 aaKnown RBP19.16■□□□□ 0.66
PNKP-215ENST00000600910 CFLARO15519 480 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 SCN2BO60939 215 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 CYC1P08574 325 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 SLC35E2P0CK97 266 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 MPIP34949 423 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 NCBP2P52298 156 aaKnown RBP eCLIP19.16■□□□□ 0.662e-9■■■■□ 25.4
PNKP-215ENST00000600910 BIKQ13323 160 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 ANXA8L1Q5VT79 327 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 ST13P4Q8IZP2 240 aaPredicted RBP19.16■□□□□ 0.66
PNKP-215ENST00000600910 VPS37AQ8NEZ2 397 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 TSPEARQ8WU66 669 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 PPWD1Q96BP3 646 aaKnown RBP19.16■□□□□ 0.66
PNKP-215ENST00000600910 AMDHD1Q96NU7 426 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 SLC25A23Q9BV35 468 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 GLIPR2Q9H4G4 154 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 SEMA3GQ9NS98 782 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 IL17BQ9UHF5 180 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 ANGPTL2Q9UKU9 493 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 PCDHGA6Q9Y5G7 932 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 MRPS18BQ9Y676 258 aaKnown RBP19.16■□□□□ 0.66
PNKP-215ENST00000600910 CACNA1AO00555 2505 aa19.16■□□□□ 0.66
PNKP-215ENST00000600910 CELSR3Q9NYQ7 3312 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 PRSS51A0A1B0GVH4 220 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 A0A1W2PP18 115 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 DYTNA2CJ06 578 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 ASPDHA6ND91 283 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 OR10H2O60403 315 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 IFNA16P05015 189 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 ATP1B1P05026 303 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 PTGER1P34995 402 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 STT3AP46977 705 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 MANFP55145 182 aaKnown RBP19.15■□□□□ 0.66
PNKP-215ENST00000600910 PLIN5Q00G26 463 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 CLN3Q13286 438 aa19.15■□□□□ 0.66
PNKP-215ENST00000600910 CYLC2Q14093 348 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms