RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 AP3S1Q92572 193 aa18.39■□□□□ 0.53
ARHGEF1-218ENST00000599589 HYLS1Q96M11 299 aa18.39■□□□□ 0.53
ARHGEF1-218ENST00000599589 PAK6Q9NQU5 681 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF1-218ENST00000599589 GKN1Q9NS71 199 aa18.39■□□□□ 0.53
ARHGEF1-218ENST00000599589 HELZP42694 1942 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-218ENST00000599589 TEX51A0A1B0GUA7 166 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 ARRDC5A6NEK1 342 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 SLC43A1O75387 559 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 IFNW1P05000 195 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CORO1AP31146 461 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 PPP3R1P63098 170 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 DOC2AQ14183 400 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 GPR33Q49SQ1 333 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CRTC2Q53ET0 693 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 PXDC1Q5TGL8 231 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 LIPJQ5W064 366 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CAMKMTQ7Z624 323 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 TSPAN33Q86UF1 283 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 GPR26Q8NDV2 337 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 HUS1BQ8NHY5 278 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 AKAP1Q92667 903 aaKnown RBP eCLIP18.38■□□□□ 0.531e-11■■■■□ 22.3
ARHGEF1-218ENST00000599589 TM9SF2Q99805 663 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 EXO1Q9UQ84 846 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 TET1Q8NFU7 2136 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CXCL10P02778 98 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 PDGFAP04085 211 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 IRF1P10914 325 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 XKP51811 444 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CCL23P55773 120 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 POU6F2P78424 691 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 EEF1A2Q05639 463 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 HEPACAMQ14CZ8 416 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 SEC23BQ15437 767 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 CDKN3Q16667 212 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 C12orf73Q69YU5 71 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR52I1Q8NGK6 324 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 RETREG1Q9H6L5 497 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 NUP50Q9UKX7 468 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 PCDHGB7Q9Y5F8 929 aa18.38■□□□□ 0.53
ARHGEF1-218ENST00000599589 ISM1B1AKI9 464 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 ADAP00813 363 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR1D2P34982 312 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 ALDH6A1Q02252 535 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 ILKQ13418 452 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR2G6Q5TZ20 316 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 CHST9Q7L1S5 443 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 LAPTM4BQ86VI4 370 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 IQCF1Q8N6M8 205 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 CIDECQ96AQ7 238 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 HCN2Q9UL51 889 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 BACE2Q9Y5Z0 518 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 INMT-MINDY4F8WBC2 141 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 BTN3A3O00478 584 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 FABP7O15540 132 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 SLC22A5O76082 557 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 DDX5P17844 614 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 MPPE1Q53F39 396 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 TJAP1Q5JTD0 557 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 RNLSQ5VYX0 342 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 TIGD4Q8IY51 512 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR8H3Q8N146 312 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR8J1Q8NGP2 316 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 MARVELD3Q96A59 401 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 SOSTQ9BQB4 213 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 TMEM43Q9BTV4 400 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 MED18Q9BUE0 208 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 PPIL3Q9H2H8 161 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 TMEM38AQ9H6F2 299 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 C12orf10Q9HB07 376 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 SGK2Q9HBY8 427 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 TVP23BQ9NYZ1 205 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 NDOR1Q9UHB4 597 aa18.37■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR5K3A6NET4 321 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TLX2O43763 284 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR10H3O60404 316 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR7A10O76100 309 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 APOL3O95236 402 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 EFEMP2O95967 443 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 IFNA14P01570 189 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 GBAP04062 536 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 RPL17P18621 184 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 IRS1P35568 1242 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 CHI3L1P36222 383 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 INPP1P49441 399 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 PUM1Q14671 1186 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■■■□ 22.1
ARHGEF1-218ENST00000599589 PLK5Q496M5 336 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TM9SF4Q92544 642 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 PDPK1O15530 556 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 RFPL3O75679 317 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 RAB36O95755 333 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 ATN1P54259 1190 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 PER3P56645 1201 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 CCDC85BQ15834 202 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 SLC5A12Q1EHB4 618 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 OXR1Q8N573 874 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 WBP2Q969T9 261 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZDHHC3Q9NYG2 299 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms