RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GCAP28676 217 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 LSP1P33241 339 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 PTGER1P34995 402 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 BSGP35613 385 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 SOX3P41225 446 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 SERPINB9P50453 376 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 HK2P52789 917 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 TNFRSF17Q02223 184 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 FOLH1Q04609 750 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 C3P1Q6ZMU1 363 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 FGD2Q7Z6J4 655 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 GPR180Q86V85 440 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 L3MBTL4Q8NA19 623 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 MORN4Q8NDC4 146 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 OR14A16Q8NHC5 309 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 WDR20Q8TBZ3 569 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 DAZLQ92904 295 aaKnown RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 RASL10BQ96S79 203 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ZBTB26Q9HCK0 441 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 DEPPQ9NTK1 212 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 MYOTQ9UBF9 498 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ADGRE2Q9UHX3 823 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 PCTPQ9UKL6 214 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 KLF13Q9Y2Y9 288 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 YARS2Q9Y2Z4 477 aaKnown RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 TNPO3Q9Y5L0 923 aaKnown RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 EXOC1LA0A1B0GW35 172 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1W2PR48 441 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1W2PS29 197 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CCDC189A1A4V9 331 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 PINLYPA6NC86 204 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 PRSS44E7EML9 344 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 PPP6CO00743 305 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 HS6ST1O60243 411 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SMIM24O75264 130 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CLDN9O95484 217 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 RBP1P09455 135 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SBK3P0C264 359 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-203ENST00000598359 GRNP28799 593 aaKnown RBP12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 STT3AP46977 705 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CCNG1P51959 295 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 RNF4P78317 190 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SERTAD2Q14140 314 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF750Q32MQ0 723 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SPPL2CQ8IUH8 684 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SRRM1Q8IYB3 904 aaKnown RBP12.76□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF721Q8TF20 911 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 ASB15Q8WXK1 588 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 DGAT2Q96PD7 388 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CENPKQ9BS16 269 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CCDC134Q9H6E4 229 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SEMA4BQ9NPR2 832 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-203ENST00000598359 SUCOQ9UBS9 1254 aaKnown RBP12.76□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF835Q9Y2P0 537 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 ASB4Q9Y574 426 aa12.76□□□□□ -0.37
SCAF1-203ENST00000598359 CELSR1Q9NYQ6 3014 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 A0A0A6YYD5 115 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 SMIM23A6NLE4 172 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 A8MVJ9 347 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 TFECO14948 347 aaPredicted RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 PROM1O43490 865 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 UGDHO60701 494 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 SNRPAP09012 282 aaKnown RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 FAM58BPP0C7Q3 252 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 ABOP16442 354 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 CDH13P55290 713 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 PHEXP78562 749 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 TRAF3Q13114 568 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 ZSCAN26Q16670 478 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 TSNAXIP1Q2TAA8 658 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 MRM1Q6IN84 353 aaKnown RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 MYO7BQ6PIF6 2116 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 CYP20A1Q6UW02 462 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 MRGPRGQ86SM5 289 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 GHDCQ8N2G8 530 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 ZCCHC7Q8N3Z6 543 aaKnown RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 PSD4Q8NDX1 1056 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 REPS1Q96D71 796 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 SENP5Q96HI0 755 aaPredicted RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 TIMMDC1Q9NPL8 285 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 FARSBQ9NSD9 589 aaKnown RBP12.75□□□□□ -0.37
SCAF1-203ENST00000598359 HPF1Q9NWY4 346 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
SCAF1-203ENST00000598359 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms