RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 TSPAN8P19075 237 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 CNR1P21554 472 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 PTGER1P34995 402 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 HSD17B3P37058 310 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 ASPHQ12797 758 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 IFT88Q13099 833 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 ZNF267Q14586 743 aaPredicted RBP13.96□□□□□ -0.17
LIG1-215ENST00000597901 GGTA1PQ4G0N0 100 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 C10orf62Q5T681 223 aaPredicted RBP13.96□□□□□ -0.17
LIG1-215ENST00000597901 OPN5Q6U736 354 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 FGD2Q7Z6J4 655 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 NUDT13Q86X67 352 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 ZNF808Q8N4W9 903 aaPredicted RBP13.96□□□□□ -0.17
LIG1-215ENST00000597901 MYRIPQ8NFW9 859 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 SGCZQ96LD1 299 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 C1QTNF3Q9BXJ4 246 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 TXLNGYQ9BZA5 131 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 WDR41Q9HAD4 459 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 SVILO95425 2214 aa13.96□□□□□ -0.17
LIG1-215ENST00000597901 IQANK1A0A1B0GTG1 560 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 A0A1B0GTH9 108 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PINLYPA6NC86 204 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PRSS44E7EML9 344 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 TFECO14948 347 aaPredicted RBP13.95□□□□□ -0.18
LIG1-215ENST00000597901 OR10H2O60403 315 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 AIFM1O95831 613 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 OTCP00480 354 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 SLC35E2P0CK97 266 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 NR2F6P10588 404 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 GALNSP34059 522 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 ADORA2A-AS1P86434 159 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PLIN5Q00G26 463 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 UNC50Q53HI1 259 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 CMPK2Q5EBM0 449 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 XKRXQ6PP77 449 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 RPTNQ6XPR3 784 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 RTL4Q6ZR62 310 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 METTL4Q8N3J2 472 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 OR2M7Q8NG81 312 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 OR52N2Q8NGI0 321 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 TRPC4APQ8TEL6 797 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 RIT1Q92963 219 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
LIG1-215ENST00000597901 FBXL20Q96IG2 436 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 ART5Q96L15 291 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PELOQ9BRX2 385 aaKnown RBP13.95□□□□□ -0.18
LIG1-215ENST00000597901 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
LIG1-215ENST00000597901 DEFB127Q9H1M4 99 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 ELOVL6Q9H5J4 265 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 FARSBQ9NSD9 589 aaKnown RBP13.95□□□□□ -0.18
LIG1-215ENST00000597901 ZNF225Q9UK10 706 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 ADAM29Q9UKF5 820 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 ENTPD4Q9Y227 616 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 MEMO1Q9Y316 297 aa13.95□□□□□ -0.18
LIG1-215ENST00000597901 PRRG2O14669 202 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 HNRNPRO43390 633 aaKnown RBP13.94□□□□□ -0.18
LIG1-215ENST00000597901 DLX3O60479 287 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 PDE9AO76083 593 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 PDYNP01213 254 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 TAC1P20366 129 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 PTGS2P35354 604 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 SMSP52788 366 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 PPIAP62937 165 aaKnown RBP13.94□□□□□ -0.18
LIG1-215ENST00000597901 HERVK_113P63132 956 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 ERVK-8P63133 956 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 CLCQ05315 142 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 SPRED3Q2MJR0 410 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 CCNYL2Q5T2Q4 361 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 LETMD1Q6P1Q0 360 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 PAGE2Q7Z2X7 111 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 LCA5Q86VQ0 697 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 AGAP11Q8TF27 550 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 CNPPD1Q9BV87 410 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 ERVK-6Q9BXR3 956 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 EPB41L4BQ9H329 900 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIG1-215ENST00000597901 TEX10Q9NXF1 929 aaPredicted RBP13.94□□□□□ -0.18
LIG1-215ENST00000597901 FETUBQ9UGM5 382 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 SNX6Q9UNH7 406 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 ERVK-19Q9WJR5 959 aa13.94□□□□□ -0.18
LIG1-215ENST00000597901 KLF2Q9Y5W3 355 aaPredicted RBP13.94□□□□□ -0.18
LIG1-215ENST00000597901 A0A1W2PS29 197 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 ARHGAP10A1A4S6 786 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 G3V3Y1 287 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 GOLGA8RI6L899 631 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 ADAM10O14672 748 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 CDC40O60508 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
LIG1-215ENST00000597901 SUPT7LO94864 414 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 OR4F21O95013 312 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 NADKO95544 446 aaPredicted RBP13.93□□□□□ -0.18
LIG1-215ENST00000597901 IMPDH1P20839 514 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 PIK3R1P27986 724 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 GRNP28799 593 aaKnown RBP13.93□□□□□ -0.18
LIG1-215ENST00000597901 XKP51811 444 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 NR0B1P51843 470 aaKnown RBP13.93□□□□□ -0.18
LIG1-215ENST00000597901 PLGLB1Q02325 96 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 ZNF791Q3KP31 576 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms