RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ITPR3Q14573 2671 aa11.16□□□□□ -0.62
SOX2-OT-228ENST00000597828 A0A1B0GVC2 190 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR14I1A6ND48 311 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 LRRC3CA6NJW4 275 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 FIGNL2A6NMB9 653 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 KDM4EB2RXH2 506 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 K7EPI3 171 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 BCKDKO14874 412 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 DIAPH2O60879 1101 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 CLPSP04118 112 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 CASP2P42575 452 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZFP36L2P47974 494 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 WNT3P56703 355 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 RPS13P62277 151 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 TRADDQ15628 312 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZNF791Q3KP31 576 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 PIGGQ5H8A4 983 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 C1orf185Q5T7R7 199 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR4C11Q6IEV9 310 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 GRHL2Q6ISB3 625 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 RGS9BPQ6ZS82 235 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 C3orf62Q6ZUJ4 267 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 RAPH1Q70E73 1250 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 MYLK4Q86YV6 388 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SRFBP1Q8NEF9 429 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR10G3Q8NGC4 313 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR5L2Q8NGL0 311 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 UBTD2Q8WUN7 234 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 NXNL1Q96CM4 212 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SENP5Q96HI0 755 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 MTERF1Q99551 399 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ERP44Q9BS26 406 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ROGDIQ9GZN7 287 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 LDAHQ9H6V9 325 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 EXO5Q9H790 373 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 RPF2Q9H7B2 306 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SH2D2AQ9NP31 389 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 ALKBH4Q9NXW9 302 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 WHRNQ9P202 907 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SPACA6W5XKT8 324 aa11.15□□□□□ -0.62
SOX2-OT-228ENST00000597828 SETD2Q9BYW2 2564 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TRGV5A0A0B4J1U4 118 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 SYNDIG1LA6NDD5 238 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 GLOD5A6NK44 160 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 FOXO6A8MYZ6 492 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TMPRSS11DO60235 418 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 KERAO60938 352 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 EEDO75530 441 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 MTHFD2P13995 350 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 COX7A2P14406 83 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 DNAJA1P31689 397 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 PIK3CGP48736 1102 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TRPC1P48995 793 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 RAP1GDS1P52306 607 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 ART1P52961 327 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 KCNJ2P63252 427 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 PLIN5Q00G26 463 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 CKAP4Q07065 602 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 CALCOCO2Q13137 446 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 MPEG1Q2M385 716 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 HYAL4Q2M3T9 481 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TMEM35AQ53FP2 167 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 DEPDC1Q5TB30 811 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 FAM219BQ5XKK7 198 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TMEM64Q6YI46 380 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 WDR53Q7Z5U6 358 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 CENPLQ8N0S6 344 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 TEX9Q8N6V9 391 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 SPATA4Q8NEY3 305 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 NUBPLQ8TB37 319 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 STAG3L4Q8TBR4 150 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 SLC22A8Q8TCC7 542 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 PAQR8Q8TEZ7 354 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 SPACA9Q96E40 222 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 CMTM7Q96FZ5 175 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 FBXL20Q96IG2 436 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 SGCZQ96LD1 299 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 ACAD8Q9UKU7 415 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 L3MBTL1Q9Y468 752 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 ANKHD1Q8IWZ3 2542 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 VPS13CQ709C8 3753 aa11.14□□□□□ -0.63
SOX2-OT-228ENST00000597828 ABCA4P78363 2273 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 SUSD5O60279 629 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 WDR1O75083 606 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 KRT38O76015 456 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 GBAP04062 536 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 LTA4HP09960 611 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 ALOX15P16050 662 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 PLTPP55058 493 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 ZNF267Q14586 743 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 SLC10A1Q14973 349 aa11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 EBPQ15125 230 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-228ENST00000597828 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms