RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 ART5Q96L15 291 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 SERPINB12Q96P63 405 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 TM9SF2Q99805 663 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 UGT2B28Q9BY64 529 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 GSX2Q9BZM3 304 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 TRIM5Q9C035 493 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 ROGDIQ9GZN7 287 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 PITHD1Q9GZP4 211 aaPredicted RBP9.27□□□□□ -0.93
TRIM28-210ENST00000597618 UBQLN3Q9H347 655 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 PIGMQ9H3S5 423 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 C6orf203Q9P0P8 240 aaPredicted RBP9.27□□□□□ -0.93
TRIM28-210ENST00000597618 C15orf41Q9Y2V0 281 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 SPACA6W5XKT8 324 aa9.27□□□□□ -0.93
TRIM28-210ENST00000597618 EML6Q6ZMW3 1958 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 CUBNO60494 3623 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 ANKDD1BA6NHY2 528 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 TP53I11O14683 189 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 CTIFO43310 598 aaKnown RBP9.26□□□□□ -0.93
TRIM28-210ENST00000597618 SNX4O95219 450 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 LRATO95237 230 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 CCDC175P0C221 793 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 CYP4B1P13584 511 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 GCKP35557 465 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 STT3AP46977 705 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 KCNJ1P48048 391 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 KCNC1P48547 511 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 MASP1P48740 699 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 VPS41P49754 854 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 HNMTP50135 292 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 DIO3P55073 304 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 EEF1A1P68104 462 aaKnown RBP9.26□□□□□ -0.93
TRIM28-210ENST00000597618 ID2Q02363 134 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 DMTNQ08495 405 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 GPS1Q13098 491 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 TRIP13Q15645 432 aaPredicted RBP9.26□□□□□ -0.93
TRIM28-210ENST00000597618 NTRK2Q16620 822 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 PPP1R3AQ16821 1122 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 EEF1A1P5Q5VTE0 462 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 HMBOX1Q6NT76 420 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 PODNL1Q6PEZ8 512 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 SBSNQ6UWP8 590 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 SLCO4C1Q6ZQN7 724 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 SLC29A4Q7RTT9 530 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 MCUQ8NE86 351 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 PPP1R14CQ8TAE6 165 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 ZPLD1Q8TCW7 415 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 DIO2Q92813 273 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 ABTB1Q969K4 478 aaPredicted RBP9.26□□□□□ -0.93
TRIM28-210ENST00000597618 FBXL20Q96IG2 436 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 DGAT2Q96PD7 388 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 GAL3ST4Q96RP7 486 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 NT5DC2Q9H857 520 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 ZNF226Q9NYT6 803 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 PACSIN3Q9UKS6 424 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 SLC6A5Q9Y345 797 aa9.26□□□□□ -0.93
TRIM28-210ENST00000597618 CAPN14A8MX76 684 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 DEFB108AA8MXU0 73 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 GOLGA8MH3BSY2 632 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 SIAH2O43255 324 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 ACSL3O95573 720 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 TBX6O95947 436 aaPredicted RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 CPOXP36551 454 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 MC3RP41968 323 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 MAGEA3P43357 314 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 PTH2RP49190 550 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 IGLV3-21P80748 117 aaPredicted RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 CDKL1Q00532 357 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 PLIN5Q00G26 463 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 FOXF2Q12947 444 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 RPS6KA2Q15349 733 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 TOMM20Q15388 145 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 DCST1Q5T197 706 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 SCIMPQ6UWF3 145 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 PACS2Q86VP3 889 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 TAGAPQ8N103 731 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 RNF10Q8N5U6 811 aaKnown RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 ZNF441Q8N8Z8 693 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 SRFBP1Q8NEF9 429 aaKnown RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 ANKRD9Q96BM1 317 aaPredicted RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 PIK3IP1Q96FE7 263 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 RBM18Q96H35 190 aaKnown RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 PDLIM5Q96HC4 596 aaKnown RBP9.25□□□□□ -0.93
TRIM28-210ENST00000597618 RILPQ96NA2 401 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 EGFL8Q99944 293 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 CAPS2Q9BXY5 557 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 WWTR1Q9GZV5 400 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 TSPY26PQ9H489 355 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 NCKAP5O14513 1909 aa9.25□□□□□ -0.93
TRIM28-210ENST00000597618 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 IQANK1A0A1B0GTG1 560 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 OR6C76A6NM76 312 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 A8MXE2 369 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 H0Y3Z8 333 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 FGF17O60258 216 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms