RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 KRT6CP48668 564 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 DNAJB13P59910 316 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 PLIN5Q00G26 463 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SLC18A2Q05940 514 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 CSTF3Q12996 717 aaKnown RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 LCP2Q13094 533 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 MAPKAPK3Q16644 382 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 MPEG1Q2M385 716 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.11□□□□□ -0.47
USE1-207ENST00000596136 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 OR52E8Q6IFG1 317 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 ZYG11AQ6WRX3 759 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 C16orf47Q6ZP98 133 aaPredicted RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 COMMD6Q7Z4G1 85 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 MDGA2Q7Z553 956 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 CYP4Z2PQ8N1L4 340 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 TMEM156Q8N614 296 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 CDYL2Q8N8U2 506 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 FAM98AQ8NCA5 519 aaKnown RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 NUBPLQ8TB37 319 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 EPS8L3Q8TE67 593 aaKnown RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 CHTF18Q8WVB6 975 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 UCN3Q969E3 161 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 TMEM125Q96AQ2 219 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 ART5Q96L15 291 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 RASL10BQ96S79 203 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 LIN28AQ9H9Z2 209 aaKnown RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 TEX10Q9NXF1 929 aaPredicted RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 VPS29Q9UBQ0 182 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SEC14L3Q9UDX4 400 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 CES1P1Q9UKY3 287 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 KLF13Q9Y2Y9 288 aaPredicted RBP12.11□□□□□ -0.47
USE1-207ENST00000596136 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 GLOD5A6NK44 160 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 HRKO00198 91 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 DYRK3O43781 588 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 ZNF354AO60765 605 aaPredicted RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 ULK1O75385 1050 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 UNC5CO95185 931 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 ESRRBO95718 433 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 ENO1P06733 434 aaKnown RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 KRT15P19012 456 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 KCNK10P57789 538 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 ALDH6A1Q02252 535 aaKnown RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 PIGGQ5H8A4 983 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 RNFT1Q5M7Z0 435 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 GFRALQ6UXV0 394 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 SULF2Q8IWU5 870 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 C16orf52Q8NHV5 167 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 AGAP11Q8TF27 550 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 AENQ8WTP8 325 aaKnown RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 TM4SF18Q96CE8 201 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 C11orf24Q96F05 449 aaPredicted RBP12.1□□□□□ -0.47
USE1-207ENST00000596136 GPR137Q96N19 417 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 MKS1Q9NXB0 559 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
USE1-207ENST00000596136 MAST4O15021 2626 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 PCNX1Q96RV3 2341 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 EML6Q6ZMW3 1958 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 A0A1B0GUH1 482 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 C1orf226A1L170 272 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 A8MVJ9 347 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 H3BQF6 201 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 WWP2O00308 870 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 UBFD1O14562 309 aaKnown RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 LRRTM2O43300 516 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 ASNA1O43681 348 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 PEX1O43933 1283 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 GUCY1B2O75343 617 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 OR6B1O95007 311 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 CLPSP04118 112 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 MYL2P10916 166 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 KRT4P19013 534 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SOX3P41225 446 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 MAPK12P53778 367 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SLC37A1P57057 533 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SRSF11Q05519 484 aaKnown RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 TCHHL1Q5QJ38 904 aaPredicted RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 FAM219BQ5XKK7 198 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SLC48A1Q6P1K1 146 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 BNC2Q6ZN30 1099 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms