RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ALPPP05187 535 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 MSL3P1P0C860 447 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 EPHB3P54753 998 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 PRSS53Q2L4Q9 553 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 UAP1L1Q3KQV9 507 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 CRTC2Q53ET0 693 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 ZNF480Q8WV37 535 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 RNF31Q96EP0 1072 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 LRR1Q96L50 414 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 CXorf36Q9H7Y0 433 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 SH2B3Q9UQQ2 575 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 CARD8Q9Y2G2 431 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 PIPSLA2A3N6 862 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 HOXA2O43364 376 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 RAB36O95755 333 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 SELPP16109 830 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 UQCRC2P22695 453 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 HTR2BP41595 481 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 PNLIPRP1P54315 467 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 TATDN3Q17R31 274 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 C12orf73Q69YU5 71 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 HSDL2Q6YN16 418 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 RASGRP3Q8IV61 690 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 PEX5LQ8IYB4 626 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 HORMAD2Q8N7B1 307 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 YIPF7Q8N8F6 280 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 AP3S1Q92572 193 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 TMEM19Q96HH6 336 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 GDF15Q99988 308 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 SORBS1Q9BX66 1292 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-213ENST00000595897 PLA2G10O15496 165 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 PRKYO43930 277 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 NME6O75414 186 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 PDE9AO76083 593 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 LGI1O95970 557 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 NR2F6P10588 404 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLC2A2P11168 524 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 HLA-FP30511 346 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 ETV5P41161 510 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 ETV1P50549 477 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 ZNF284Q2VY69 593 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 RASGEF1AQ8N9B8 481 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 FAM181AQ8N9Y4 354 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 VN1R3Q9BXE9 311 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 CPEB1Q9BZB8 566 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 SLC25A13Q9UJS0 675 aa16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 ZNF106Q9H2Y7 1883 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-213ENST00000595897 FOXE1O00358 373 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 QSOX1O00391 747 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 SEMA7AO75326 666 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 NPPBP16860 134 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 ERP29P30040 261 aaKnown RBP16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 CAV3P56539 151 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 BNC1Q01954 994 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 SPDYE7PQ495Y7 208 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 OR2G6Q5TZ20 316 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 TYW3Q6IPR3 259 aaKnown RBP16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 PGBD2Q6P3X8 592 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 UNC5DQ6UXZ4 953 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 GDPD4Q6W3E5 623 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 PDZD3Q86UT5 571 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 SYT14Q8NB59 555 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 GPR32P1Q8NGA4 272 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 OR52I1Q8NGK6 324 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 PDXPQ96GD0 296 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 TM9SF2Q99805 663 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 SYT17Q9BSW7 474 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 ACOXLQ9NUZ1 547 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 DKK3Q9UBP4 350 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 NDRG2Q9UN36 371 aaKnown RBP16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 HS3ST2Q9Y278 367 aa16.52■□□□□ 0.23
ARHGEF1-213ENST00000595897 SLC30A4O14863 429 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 C1GALT1C1LP0DN25 315 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 APEX1P27695 318 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 RECQLP46063 649 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 MANFP55145 182 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 FAPQ12884 760 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 GPR19Q15760 415 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 TPGS2Q68CL5 300 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 Q8N402 240 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 SLC7A13Q8TCU3 470 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 GON7Q9BXV9 100 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 SEC14L3Q9UDX4 400 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 NDOR1Q9UHB4 597 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 DIMT1Q9UNQ2 313 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 CLCA3PQ9Y6N3 262 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 NPC1O15118 1278 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 LRRTM2O43300 516 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 CYP2A6P11509 494 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 CPEP16870 476 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 MAP2K3P46734 347 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 GPLD1P80108 840 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 PIN1Q13526 163 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 OCLNQ16625 522 aa16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.51■□□□□ 0.23
ARHGEF1-213ENST00000595897 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms