RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 VWA5B1Q5TIE3 1220 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 MED25Q71SY5 747 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 TMEM102Q8N9M5 508 aaPredicted RBP18.46■□□□□ 0.55
LSM4-203ENST00000593829 METTL6Q8TCB7 284 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 GATA5Q9BWX5 397 aaPredicted RBP18.46■□□□□ 0.55
LSM4-203ENST00000593829 RBCK1Q9BYM8 510 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 VN1R1Q9GZP7 353 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 GMEB1Q9Y692 573 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 LOC100653049A0A140TA62 436 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 H0YJX3 145 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 RTCAO00442 366 aaKnown RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 KRT34O76011 436 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 HSPA4LO95757 839 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 ATP5A1P25705 553 aaKnown RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 CERS1P27544 350 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 PIK3R1P27986 724 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 HMOX2P30519 316 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 SSR2P43308 183 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 TSFMP43897 325 aaKnown RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 APOFQ13790 326 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 RUNX2Q13950 521 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 PIGGQ5H8A4 983 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 OR4C11Q6IEV9 310 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 KIRREL2Q6UWL6 708 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 SELENOMQ8WWX9 145 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 WBP1Q96G27 269 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 MPP4Q96JB8 637 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 LRGUKQ96M69 825 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 FER1L6-AS2Q96M78 137 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 ING2Q9H160 280 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 ZNF385DQ9H6B1 395 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 TCF7L2Q9NQB0 619 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 LANCL2Q9NS86 450 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 UBFD1O14562 309 aaKnown RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 ALOX12BO75342 701 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 CDC123O75794 336 aaPredicted RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 HIST1H1TP22492 207 aaPredicted RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 SLC9B1Q4ZJI4 515 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 ZNF793Q6ZN11 406 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 BNC2Q6ZN30 1099 aaPredicted RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 ZNF781Q8N8C0 355 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 ACOT4Q8N9L9 421 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 METTL21AQ8WXB1 218 aa18.45■□□□□ 0.54
LSM4-203ENST00000593829 FARSBQ9NSD9 589 aaKnown RBP18.45■□□□□ 0.54
LSM4-203ENST00000593829 PRSS51A0A1B0GVH4 220 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 MANBAO00462 879 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 PLPP1O14494 284 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 B4GALT2O60909 372 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 ULK1O75385 1050 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 OR6B1O95007 311 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 SCELO95171 688 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 ETHE1O95571 254 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 PDYNP01213 254 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 ACPPP15309 386 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 CPZQ66K79 652 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 FAAH2Q6GMR7 532 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 PGAM4Q8N0Y7 254 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 ADAMTS18Q8TE60 1221 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 TRMOQ9BU70 441 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 OCEL1Q9H607 264 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 BRF2Q9HAW0 419 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 TIMMDC1Q9NPL8 285 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 UBAP1Q9NZ09 502 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 DAPP1Q9UN19 280 aa18.44■□□□□ 0.54
LSM4-203ENST00000593829 ARHGAP10A1A4S6 786 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 SLCO1B7G3V0H7 640 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 SEMA3DO95025 777 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 C8orf89P0DMQ9 161 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 EFNA3P52797 238 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 LIM2P55344 173 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 RAB38P57729 211 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 DCAF10Q5QP82 559 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 TMEM205Q6UW68 189 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 HIPK4Q8NE63 616 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 OR11G2Q8NGC1 345 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 SORBS1Q9BX66 1292 aaKnown RBP18.43■□□□□ 0.54
LSM4-203ENST00000593829 SHCBP1LQ9BZQ2 653 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 ILKAPQ9H0C8 392 aaPredicted RBP18.43■□□□□ 0.54
LSM4-203ENST00000593829 LYRM4Q9HD34 91 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 FBXL4Q9UKA2 621 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 RAP2CQ9Y3L5 183 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 AP4B1Q9Y6B7 739 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 OR2W5A6NFC9 320 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 FAM227AF5H4B4 570 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 HDAC3O15379 428 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 FAM87AP0C7U9 286 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 RHAGQ02094 409 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 ZNF33BQ06732 778 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 CHAF1BQ13112 559 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 PCSK4Q6UW60 755 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 PLPP5Q8NEB5 264 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 ITFG2Q969R8 447 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 C8orf44Q96CB5 159 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 NMD3Q96D46 503 aaKnown RBP18.43■□□□□ 0.54
LSM4-203ENST00000593829 KCNA7Q96RP8 456 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 MESP1Q9BRJ9 268 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 AHSPQ9NZD4 102 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 VTI1BQ9UEU0 232 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 TIMM22Q9Y584 194 aa18.43■□□□□ 0.54
LSM4-203ENST00000593829 PCSK5Q92824 1860 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms