RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 VN1R1Q9GZP7 353 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF350Q9GZX5 532 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 GOLPH3LQ9H4A5 285 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TUFT1Q9NNX1 390 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 DNAJC17Q9NVM6 304 aaKnown RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 SMPD3Q9NY59 655 aaPredicted RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ERAP1Q9NZ08 941 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TBC1D7Q9P0N9 293 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 FBXW2Q9UKT8 454 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 C15orf41Q9Y2V0 281 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 STRAPQ9Y3F4 350 aaKnown RBP4.43□□□□□ -1.7
SMAD4-216ENST00000593223 TEX264Q9Y6I9 313 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ADGRB1O14514 1584 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 ANKRD31Q8N7Z5 1873 aa4.43□□□□□ -1.7
SMAD4-216ENST00000593223 BCORQ6W2J9 1755 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF292O60281 2723 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 WDFY4Q6ZS81 3184 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 C15orf38-AP3S2A0A0A6YYH1 394 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 SMIM30A4D0T7 59 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 OR6C74A6NCV1 312 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 RSPH10B2B2RC85 870 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 HHLA1C9JL84 531 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 F8WDY8 70 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 GAPDHSO14556 408 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF609O15014 1411 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 MAST4O15021 2626 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 EDIL3O43854 480 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZG16O60844 167 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 RHBDL1O75783 438 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 AKAP3O75969 853 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 OTCP00480 354 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 OR2T7P0C7T2 308 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 PLA2G4BP0C869 781 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 RSPH10BP0C881 870 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 PATE4P0C8F1 98 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 EPB41P11171 864 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 HPGDP15428 266 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 PFKFB1P16118 471 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 HNRNPA2B1P22626 353 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CALB2P22676 271 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ITGA3P26006 1051 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 SLC6A6P31641 620 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CEACAM8P31997 349 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 MC5RP33032 325 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CTNNB1P35222 781 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 TAGLN2P37802 199 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CRKLP46109 303 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 GMPSP49915 693 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF75DP51815 510 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 METAP1P53582 386 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ATP12AP54707 1039 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 HSPA14Q0VDF9 509 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 OVGP1Q12889 678 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CUL1Q13616 776 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 LETM2Q2VYF4 491 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CBWD6Q4V339 395 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 KLHL26Q53HC5 615 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CBWD3Q5JTY5 395 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 DCAF10Q5QP82 559 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ADAM5Q6NVV9 412 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 GSG1LQ6UXU4 331 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 LINGO4Q6UY18 593 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 KIF6Q6ZMV9 814 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 NKAIN4Q8IVV8 208 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 SLC7A5P1Q8MH63 180 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF383Q8NA42 475 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 TSPAN14Q8NG11 270 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 GOLGA5Q8TBA6 731 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 NXNL1Q96CM4 212 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 MTMR9Q96QG7 549 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 PARK7Q99497 189 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 BTBD10Q9BSF8 475 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CRNKL1Q9BZJ0 848 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 RAB33BQ9H082 229 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 S1PR5Q9H228 398 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 EXO5Q9H790 373 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 RMND5AQ9H871 391 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 SIX2Q9NPC8 291 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 PPANQ9NQ55 473 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 EQTNQ9NQ60 294 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 GDE1Q9NZC3 331 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 CHMP5Q9NZZ3 219 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 DDX25Q9UHL0 483 aaKnown RBP4.42□□□□□ -1.7
SMAD4-216ENST00000593223 MAB21L2Q9Y586 359 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 MRC1P22897 1456 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 STK36Q9NRP7 1315 aa4.42□□□□□ -1.7
SMAD4-216ENST00000593223 FAM208AQ9UK61 1670 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 C5orf51A6NDU8 294 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 ARHGAP42A6NI28 874 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 GOLGA8SH3BPF8 625 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 SLC22A2O15244 555 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PIGNO95427 931 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PTBP3O95758 552 aaKnown RBP4.41□□□□□ -1.7
SMAD4-216ENST00000593223 PCCBP05166 539 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 CD48P09326 243 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 STAG3L3P0CL85 134 aa4.41□□□□□ -1.7
SMAD4-216ENST00000593223 AREGP15514 252 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms