RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 A0A1B0GVC2 190 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 FOXO6A8MYZ6 492 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 AQP7O14520 342 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 MTHFD2P13995 350 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 ALOX15P16050 662 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 TLX1P31314 330 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 RPS13P62277 151 aaKnown RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 CAV1Q03135 178 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 SLC10A1Q14973 349 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 HYAL4Q2M3T9 481 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 ZNF791Q3KP31 576 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 PRAMEF20Q5VT98 475 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 SLC22A10Q63ZE4 541 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 B3GNT6Q6ZMB0 384 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 TANKQ92844 425 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 MRRFQ96E11 262 aaKnown RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 GAL3ST4Q96RP7 486 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 TTYH2Q9BSA4 534 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 ACTR8Q9H981 624 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 ACAD8Q9UKU7 415 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 FAM215AQ9Y5M1 114 aa18.89■□□□□ 0.61
TRIM47-207ENST00000593089 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.89■□□□□ 0.61
TRIM47-207ENST00000593089 SYCE1LA8MT33 242 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 NADKO95544 446 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-207ENST00000593089 GFAPP14136 432 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 PIK3CBP42338 1070 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 HERVK_113P63132 956 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ERVK-8P63133 956 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 KCNJ2P63252 427 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 BIKQ13323 160 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 NAB1Q13506 487 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 PFKFB4Q16877 469 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 RTL6Q6ICC9 239 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 LYPD8Q6UX82 237 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ZDHHC24Q6UX98 284 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 DMRTC2Q8IXT2 367 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-207ENST00000593089 CENPLQ8N0S6 344 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ZCCHC7Q8N3Z6 543 aaKnown RBP18.88■□□□□ 0.61
TRIM47-207ENST00000593089 FBXL20Q96IG2 436 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ERVK-6Q9BXR3 956 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 RAB17Q9H0T7 212 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ALKBH4Q9NXW9 302 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ERVK-19Q9WJR5 959 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 ANKRD17O75179 2603 aaKnown RBP18.88■□□□□ 0.61
TRIM47-207ENST00000593089 NCKAP5O14513 1909 aa18.88■□□□□ 0.61
TRIM47-207ENST00000593089 A0A087X1B8 175 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 TRGV5A0A0B4J1U4 118 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 LRRC14BA6NHZ5 514 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 GLOD5A6NK44 160 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 WASHC1A8K0Z3 465 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SUSD5O60279 629 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 OR10H2O60403 315 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 GLI4P10075 376 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 BUD31P41223 144 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-207ENST00000593089 PHEXP78562 749 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 ZNF267Q14586 743 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SETDB1Q15047 1291 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 TESK1Q15569 626 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 WLSQ5T9L3 541 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 MROH9Q5TGP6 573 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 LIPJQ5W064 366 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 ADGRD1Q6QNK2 874 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SLC29A4Q7RTT9 530 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 ST13P4Q8IZP2 240 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-207ENST00000593089 FAM13CQ8NE31 585 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 RHEBL1Q8TAI7 183 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 PAQR8Q8TEZ7 354 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SARAFQ96BY9 339 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SPACA9Q96E40 222 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-207ENST00000593089 ZNF559Q9BR84 538 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SH2D2AQ9NP31 389 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM47-207ENST00000593089 PCDHGA11Q9Y5H2 935 aa18.87■□□□□ 0.61
TRIM47-207ENST00000593089 CELSR1Q9NYQ6 3014 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 A0A0G2JNJ9 132 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 IQANK1A0A1B0GTG1 560 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 PROM1O43490 865 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 EEDO75530 441 aaKnown RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 C2P06681 752 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 HOXD4P09016 255 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 RFPL3SP0C7P2 107 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 PTX3P26022 381 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 ZFP36L2P47974 494 aaKnown RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 CPSF6Q16630 551 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 FAM83EQ2M2I3 478 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 C1orf185Q5T7R7 199 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 CYP20A1Q6UW02 462 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 RNF111Q6ZNA4 994 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 TMEM200AQ86VY9 491 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 SLC15A4Q8N697 577 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 ANP32BQ92688 251 aaKnown RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 REPS1Q96D71 796 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 JSRP1Q96MG2 331 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 ZNF717Q9BY31 904 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 ZNF703Q9H7S9 590 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 SNX15Q9NRS6 342 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 LYARQ9NX58 379 aaKnown RBP18.86■□□□□ 0.61
TRIM47-207ENST00000593089 SPRR3Q9UBC9 169 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 Q9UFV3 132 aa18.86■□□□□ 0.61
TRIM47-207ENST00000593089 BOKQ9UMX3 212 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms