RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 CLGNO14967 610 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SMAD7O15105 426 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SMPD2O60906 423 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 ACSL3O95573 720 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 IGKV3-11P04433 115 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 NCF1P14598 390 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 CPN2P22792 545 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 RPL21P46778 160 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SLC29A4Q7RTT9 530 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 CIARTQ8N365 385 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 ACOT4Q8N9L9 421 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SPC24Q8NBT2 197 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SRFBP1Q8NEF9 429 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 DIO2Q92813 273 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 RHBDF1Q96CC6 855 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 ART5Q96L15 291 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 DACH2Q96NX9 599 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 WDR83Q9BRX9 315 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 PRDM14Q9GZV8 571 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 GPRC5BQ9NZH0 403 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 CTNNAL1Q9UBT7 734 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 CNOT11Q9UKZ1 510 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 ZNF490Q9ULM2 529 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 SLC6A5Q9Y345 797 aa17.99■□□□□ 0.47
PRKCSH-216ENST00000592445 IQANK1A0A1B0GTG1 560 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 CD8B2A6NJW9 211 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 HRKO00198 91 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 CASKO14936 926 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 FGF17O60258 216 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 ERN1O75460 977 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 ATP5A1P25705 553 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 PPP2R2BQ00005 443 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 TOMM20Q15388 145 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 TSNQ15631 228 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 TBCELQ5QJ74 424 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 ZNF793Q6ZN11 406 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 ADAMTSL2Q86TH1 951 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 SPATA3Q8NHX4 192 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 FBXL20Q96IG2 436 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 KRT12Q99456 494 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 TBCDQ9BTW9 1192 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 RBM24Q9BX46 236 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 EHD1Q9H4M9 534 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 JKAMPQ9P055 326 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 EIF3LQ9Y262 564 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 CSPG4Q6UVK1 2322 aa17.98■□□□□ 0.47
PRKCSH-216ENST00000592445 A0A1W2PPR1 153 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 SH3D21A4FU49 640 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 MBD3L4A6NDZ8 208 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 MBD3L3A6NE82 208 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 MBD3L5A6NJ08 208 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 RTCAO00442 366 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 TRIM3O75382 744 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 IL18BPO95998 194 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 CPA2P48052 419 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 PLIN5Q00G26 463 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 ZNF460Q14592 562 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 AP5B1Q2VPB7 878 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 RNASEH2BQ5TBB1 312 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 VASNQ6EMK4 673 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 DGAT2L6Q6ZPD8 337 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 SYDE1Q6ZW31 735 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 CXXC5Q7LFL8 322 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 UBE3DQ7Z6J8 389 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 IGDCC3Q8IVU1 814 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 SNX31Q8N9S9 440 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 SIMC1Q8NDZ2 872 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 MBD3L2Q8NHZ7 208 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 DOK4Q8TEW6 326 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 SMPDL3BQ92485 455 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 ISL2Q96A47 359 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 PTCD3Q96EY7 689 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 CFAP36Q96G28 342 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 Q96MF0 132 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 BDH2Q9BUT1 245 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 CALHM2Q9HA72 323 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 DNAJC11Q9NVH1 559 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 WWOXQ9NZC7 414 aa17.97■□□□□ 0.47
PRKCSH-216ENST00000592445 NINQ8N4C6 2090 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 TP53I11O14683 189 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 HPNP05981 417 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 TMIGD3P0DMS9 266 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 HIST1H1TP22492 207 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 MASP1P48740 699 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 CDK9P50750 372 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 HERVK_113P63132 956 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 ERVK-8P63133 956 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 IGLV3-21P80748 117 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 DOC2AQ14183 400 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 RCAN2Q14206 197 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 NTRK2Q16620 822 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 HIST2H2ACQ16777 129 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 MSS51Q4VC12 460 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 HIST2H2AA3Q6FI13 130 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 RNF111Q6ZNA4 994 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 LUZP2Q86TE4 346 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 TAGAPQ8N103 731 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 LRRC75A-AS1Q8N1F1 130 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 TRIM58Q8NG06 486 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms