RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CCNYL2Q5T2Q4 361 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 CYP4Z2PQ8N1L4 340 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 TMEM156Q8N614 296 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 OR2W6PQ8NHA6 318 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 UCN3Q969E3 161 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 TMEM125Q96AQ2 219 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 FBXL20Q96IG2 436 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 HBEGFQ99075 208 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 LIN28AQ9H9Z2 209 aaKnown RBP25.29■■□□□ 1.64
SMAD4-213ENST00000591914 NMRK1Q9NWW6 199 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 OSGIN2Q9Y236 505 aa25.29■■□□□ 1.64
SMAD4-213ENST00000591914 SPTAN1Q13813 2472 aaKnown RBP25.29■■□□□ 1.64
SMAD4-213ENST00000591914 ARHGAP10A1A4S6 786 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 DYRK3O43781 588 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 ENO1P06733 434 aaKnown RBP25.28■■□□□ 1.64
SMAD4-213ENST00000591914 SLC18A2Q05940 514 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 CSTF3Q12996 717 aaKnown RBP25.28■■□□□ 1.64
SMAD4-213ENST00000591914 NDUFAF5Q5TEU4 345 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 EMBQ6PCB8 327 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 FAM98AQ8NCA5 519 aaKnown RBP25.28■■□□□ 1.64
SMAD4-213ENST00000591914 RDH11Q8TC12 318 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 METTL6Q8TCB7 284 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 ART5Q96L15 291 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 VPS29Q9UBQ0 182 aa25.28■■□□□ 1.64
SMAD4-213ENST00000591914 WIPF3A6NGB9 483 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 COPEO14579 308 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 ULK1O75385 1050 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 ESRRBO95718 433 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 HMOX2P30519 316 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 GALNSP34059 522 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 MAPK12P53778 367 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 KCNK10P57789 538 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 DNAJB13P59910 316 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 NAA20P61599 178 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 SPRED3Q2MJR0 410 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.27■■□□□ 1.64
SMAD4-213ENST00000591914 GPALPP1Q8IXQ4 340 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 RIBC1Q8N443 379 aaPredicted RBP25.27■■□□□ 1.64
SMAD4-213ENST00000591914 CCNYL1Q8N7R7 359 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 OR5L2Q8NGL0 311 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 AGAP11Q8TF27 550 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 RASL10BQ96S79 203 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 SEC14L3Q9UDX4 400 aa25.27■■□□□ 1.64
SMAD4-213ENST00000591914 UTP20O75691 2785 aaKnown RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 HRKO00198 91 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 WWP2O00308 870 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 UBFD1O14562 309 aaKnown RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 OR10H2O60403 315 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 UNC5CO95185 931 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 LDLRP01130 860 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 STSP08842 583 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 SLC35E2P0CK97 266 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 GFRALQ6UXV0 394 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 MDGA2Q7Z553 956 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 C4orf33Q8N1A6 199 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 C1orf52Q8N6N3 182 aaKnown RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 GBP7Q8N8V2 638 aaPredicted RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 CAVIN3Q969G5 261 aa25.26■■□□□ 1.63
SMAD4-213ENST00000591914 C12orf65Q9H3J6 166 aaKnown RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 KLF13Q9Y2Y9 288 aaPredicted RBP25.26■■□□□ 1.63
SMAD4-213ENST00000591914 TLDC2A0PJX2 215 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 GUCY1B2O75343 617 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 WISP2O76076 250 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 CHN1P15882 459 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 HTR6P50406 440 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 NAGLUP54802 743 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 C4orf17Q53FE4 359 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 FRMD7Q6ZUT3 714 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 C9orf40Q8IXQ3 194 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 NUBPLQ8TB37 319 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 CHTF18Q8WVB6 975 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 SREK1Q8WXA9 508 aaKnown RBP25.25■■□□□ 1.63
SMAD4-213ENST00000591914 ASB15Q8WXK1 588 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 RIT1Q92963 219 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 ACPTQ9BZG2 426 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 MID1IP1Q9NPA3 183 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 OXSMQ9NWU1 459 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 MKS1Q9NXB0 559 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.25■■□□□ 1.63
SMAD4-213ENST00000591914 V9GYY5 206 aaPredicted RBP25.25■■□□□ 1.63
SMAD4-213ENST00000591914 DOPEY1Q5JWR5 2465 aa25.25■■□□□ 1.63
SMAD4-213ENST00000591914 A0A1W2PS29 197 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 CCDC151A5D8V7 595 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 A8MVJ9 347 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 ESPNB1AK53 854 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 OR6B1O95007 311 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 CPA3P15088 417 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 PIK3R1P27986 724 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 SOX3P41225 446 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 ALDH6A1Q02252 535 aaKnown RBP25.24■■□□□ 1.63
SMAD4-213ENST00000591914 MPEG1Q2M385 716 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 SIAH3Q8IW03 269 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 CPSF7Q8N684 471 aaKnown RBP25.24■■□□□ 1.63
SMAD4-213ENST00000591914 OR4K14Q8NGD5 310 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 KCNA7Q96RP8 456 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 CNPPD1Q9BV87 410 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMAD4-213ENST00000591914 HPF1Q9NWY4 346 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 LGALS13Q9UHV8 139 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 ERVK-11Q9UQG0 969 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms