RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DLG1Q12959 904 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CHIT1Q13231 466 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 GXYLT1Q4G148 440 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 PIGGQ5H8A4 983 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 DEPDC1Q5TB30 811 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 OPN5Q6U736 354 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF793Q6ZN11 406 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 RTL4Q6ZR62 310 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CLNKQ7Z7G1 428 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SLC22A16Q86VW1 577 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 RELL1Q8IUW5 271 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SNX31Q8N9S9 440 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF721Q8TF20 911 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CHTF18Q8WVB6 975 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 KCTD4Q8WVF5 259 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ANKRD9Q96BM1 317 aaPredicted RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SCYL1Q96KG9 808 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 PAFAH2Q99487 392 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 MAPKAP1Q9BPZ7 522 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 FAM173AQ9BQD7 235 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 MS4A8Q9BY19 250 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 DEFB127Q9H1M4 99 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 VPS11Q9H270 941 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ALG9Q9H6U8 611 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 COPS7BQ9H9Q2 264 aaPredicted RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IL1RL2Q9HB29 575 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SNX15Q9NRS6 342 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CD274Q9NZQ7 290 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ADGRE2Q9UHX3 823 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 RNF6Q9Y252 685 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 TSC22D4Q9Y3Q8 395 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CCDC168Q8NDH2 2452 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 HMX2A2RU54 273 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 FOXO6A8MYZ6 492 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 C17orf105B2RV13 164 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SUPT3HB4E1H0 165 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ACOT7O00154 380 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 RIPK2O43353 540 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SUSD5O60279 629 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF354AO60765 605 aaPredicted RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 LDB3O75112 727 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SUPT3HO75486 399 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SLU7O95391 586 aaKnown RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ETHE1O95571 254 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SLC35E2BP0CK96 405 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TNNI3P19429 210 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TYK2P29597 1187 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SERPINB8P50452 374 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TLE4Q04727 773 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 PMPCAQ10713 525 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 FOXO1Q12778 655 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 AP5B1Q2VPB7 878 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF750Q32MQ0 723 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF791Q3KP31 576 aaPredicted RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 MED27Q6P2C8 311 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SPNS3Q6ZMD2 512 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 MEX3BQ6ZN04 569 aaKnown RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 GK5Q6ZS86 529 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ACAD11Q709F0 780 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 LRRC70Q7Z2Q7 622 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TBC1D1Q86TI0 1168 aaPredicted RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SLC15A4Q8N697 577 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF321PQ8N8H1 164 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 OR7G3Q8NG95 312 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 NUBPLQ8TB37 319 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SLC2A12Q8TD20 617 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 UBLCP1Q8WVY7 318 aaPredicted RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SLC44A1Q8WWI5 657 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 NXNL1Q96CM4 212 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 CMTM7Q96FZ5 175 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SENP5Q96HI0 755 aaPredicted RBP9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ATOH8Q96SQ7 321 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 TTTY12Q9BZ98 90 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 OR8D2Q9GZM6 311 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 ANKZF1Q9H8Y5 726 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 NMRAL1Q9HBL8 299 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SH2D2AQ9NP31 389 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 KCNJ16Q9NPI9 418 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 MS4A12Q9NXJ0 267 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 RNF112Q9ULX5 631 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 SPACA6W5XKT8 324 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
VPS4B-207ENST00000591519 A0A096LPK6 155 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 CCDC189A1A4V9 331 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 SMIM23A6NLE4 172 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TRIM49D1C9J1S8 452 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 K7EPI3 171 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 BCKDKO14874 412 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 CCNT2O60583 730 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 TGFB1P01137 390 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 S100BP04271 92 aaPredicted RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 IGKV3-11P04433 115 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 C2P06681 752 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 LTA4HP09960 611 aaKnown RBP9.61□□□□□ -0.87
VPS4B-207ENST00000591519 MTHFD2P13995 350 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 CRABP2P29373 138 aa9.61□□□□□ -0.87
VPS4B-207ENST00000591519 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms