RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UTP15Q8TED0 518 aaKnown RBP9.83□□□□□ -0.84
VPS25-203ENST00000589520 GIPC3Q8TF64 312 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 SLC38A5Q8WUX1 472 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 NCSTNQ92542 709 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 NR4A3Q92570 626 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 PROX1Q92786 737 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 FKBP10Q96AY3 582 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 TAMM41Q96BW9 452 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 FBXL20Q96IG2 436 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 SLC35G5Q96KT7 338 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 IER2Q9BTL4 223 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 BTBD2Q9BX70 525 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 AICDAQ9GZX7 198 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 CD93Q9NPY3 652 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 SLAMF7Q9NQ25 335 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 EXD2Q9NVH0 621 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 HRASLS2Q9NWW9 162 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 NDUFAF4Q9P032 175 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 KIF17Q9P2E2 1029 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ABCG2Q9UNQ0 655 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 LIPT1Q9Y234 373 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ATG4BQ9Y4P1 393 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ENPP4Q9Y6X5 453 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
VPS25-203ENST00000589520 ZDBF2Q9HCK1 2354 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 A0A0G2JPF8 293 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 GSAPA4D1B5 854 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 BLACEA4D250 179 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 FAM86C2PA6NEL3 165 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 OR5K3A6NET4 321 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 TMEM229AB2RXF0 380 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 HNRNPCL2B2RXH8 293 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 HNRNPCL3B7ZW38 293 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 HMGN4O00479 90 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 AHCYL1O43865 530 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 SEC24DO94855 1032 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 AIFM1O95831 613 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 IFNW1P05000 195 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 CCDC159P0C7I6 412 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 HNRNPCL4P0DMR1 293 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 JUNDP17535 347 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 CPN2P22792 545 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 CD38P28907 300 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 PXNP49023 591 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 CDK9P50750 372 aaKnown RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 DAPP51397 102 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 CRYBA2P53672 197 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 MAPK10P53779 464 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 IST1P53990 364 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ISL1P61371 349 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 RACK1P63244 317 aaKnown RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 TNFRSF17Q02223 184 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZIK1Q3SY52 487 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZBED5Q49AG3 693 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 C6orf141Q5SZD1 244 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 BROXQ5VW32 411 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 FCRL6Q6DN72 434 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 Q6ZS52 159 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 RNF44Q7L0R7 432 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 GPR141Q7Z602 305 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 SATL1Q86VE3 508 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 HORMAD2Q8N7B1 307 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ATG16L2Q8NAA4 619 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZDHHC1Q8WTX9 485 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 FBLIM1Q8WUP2 373 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZNF566Q969W8 418 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZNF354BQ96LW1 612 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 MBOAT4Q96T53 435 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 PIP5K1AQ99755 562 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ORAI3Q9BRQ5 295 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 GRIP2Q9C0E4 1043 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZNF556Q9HAH1 456 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 KRT84Q9NSB2 600 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ZCCHC3Q9NUD5 404 aaKnown RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 NTMQ9P121 344 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 TMEFF2Q9UIK5 374 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 ACSL6Q9UKU0 697 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 RAB23Q9ULC3 237 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 PNMA8BQ9ULN7 279 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 PCDHGB5Q9Y5G0 923 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 MAGED1Q9Y5V3 778 aaPredicted RBP9.82□□□□□ -0.84
VPS25-203ENST00000589520 SLC22A7Q9Y694 548 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 U3KQV3 271 aa9.82□□□□□ -0.84
VPS25-203ENST00000589520 CHD7Q9P2D1 2997 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 CHD9Q3L8U1 2897 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 TRBV23OR9-2A0A075B6M9 112 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 A0A0J9YVX5 310 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 FAM170BA6NMN3 283 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 VGLL3A8MV65 326 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 BCKDKO14874 412 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 SCAMP1O15126 338 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 CASC3O15234 703 aaKnown RBP9.81□□□□□ -0.84
VPS25-203ENST00000589520 SRPX2O60687 465 aaPredicted RBP9.81□□□□□ -0.84
VPS25-203ENST00000589520 ERAL1O75616 437 aaKnown RBP9.81□□□□□ -0.84
VPS25-203ENST00000589520 MFN2O95140 757 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 OXSR1O95747 527 aaPredicted RBP9.81□□□□□ -0.84
VPS25-203ENST00000589520 C1QCP02747 245 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 CSF2P04141 144 aa9.81□□□□□ -0.84
VPS25-203ENST00000589520 FESP07332 822 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms