RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TECRQ9NZ01 308 aaKnown RBP2.86□□□□□ -1.95
SMAD4-207ENST00000589076 MRTO4Q9UKD2 239 aaKnown RBP2.86□□□□□ -1.95
SMAD4-207ENST00000589076 DNPEPQ9ULA0 475 aa2.86□□□□□ -1.95
SMAD4-207ENST00000589076 CACNA1FO60840 1977 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 RNF103-CHMP3A0A140T963 221 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 BCLAF3A2AJT9 711 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 CCDC69A6NI79 296 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 SNAP91O60641 907 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 CSO75390 466 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ALPPP05187 535 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PGK2P07205 417 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 FHP07954 510 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 HIST1H2AGP0C0S8 130 aaPredicted RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 CCDC192P0DO97 292 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ALPPL2P10696 532 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PCP11498 1178 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 IL10P22301 178 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 MARCKSP29966 332 aaPredicted RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 TNFRSF4P43489 277 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 SRP54P61011 504 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 FKBP3Q00688 224 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ZNF146Q15072 292 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PDK1Q15118 436 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 KNOP1Q1ED39 458 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 DDI2Q5TDH0 399 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PRAMEF7Q5VXH5 474 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 CNSTQ6PJW8 725 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 CDHR3Q6ZTQ4 885 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ADAMTSL2Q86TH1 951 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ZNF440Q8IYI8 595 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ZNF619Q8N2I2 560 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 LRRC15Q8TF66 581 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 U2AF1L4Q8WU68 220 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 UBE2Q2Q8WVN8 375 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PCNPQ8WW12 178 aaKnown RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 HIST1H2ACQ93077 130 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 RUNDC3BQ96NL0 473 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ANKRD27Q96NW4 1050 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 TMEM237Q96Q45 408 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 FUNDC2Q9BWH2 189 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 WDR41Q9HAD4 459 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 THYN1Q9P016 225 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 THAP10Q9P2Z0 257 aaPredicted RBP2.85□□□□□ -1.95
SMAD4-207ENST00000589076 ERVK-18Q9QC07 812 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 FAM153AQ9UHL3 310 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 NARFQ9UHQ1 456 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 RPGRIP1LQ68CZ1 1315 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PCNX3Q9H6A9 2034 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 PTPRUQ92729 1446 aa2.85□□□□□ -1.95
SMAD4-207ENST00000589076 BICDL2A1A5D9 508 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ARHGAP42A6NI28 874 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ARHGEF33A8MVX0 844 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TMCO5BA8MYB1 307 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NEDD8-MDP1E9PL57 170 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 E9PQ18 207 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FBP2O00757 339 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ARPC1BO15143 372 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TSPAN2O60636 221 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CALCAP01258 141 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 SLC4A1P02730 911 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ADORA3P0DMS8 318 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 MBL2P11226 248 aaPredicted RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CD1DP15813 335 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 SELEP16581 610 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 GAP43P17677 238 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ACP1P24666 158 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CAPGP40121 348 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ACADSBP45954 432 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 PITPNBP48739 271 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NUMBP49757 651 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 RIDAP52758 137 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 LIMK2P53671 638 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 RPL27P61353 136 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 SRPXP78539 464 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FASTKQ14296 549 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 GAMTQ14353 236 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 SLC17A1Q14916 467 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 P2RY14Q15391 338 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 PKN2Q16513 984 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CARTPTQ16568 116 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ECSCRQ19T08 205 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CCDC40Q4G0X9 1142 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 PARP10Q53GL7 1025 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TOR1AIP1Q5JTV8 583 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TEX35Q5T0J7 233 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FAM182AQ5T1J6 154 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NEPROQ6NW34 567 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 DOK6Q6PKX4 331 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 MFSD7Q6UXD7 560 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TAF8Q7Z7C8 310 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ZSCAN30Q86W11 494 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 CARM1Q86X55 608 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FAM131BQ86XD5 332 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 HDDC3Q8N4P3 179 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 MRPL43Q8N983 215 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 OR52E1Q8NGJ3 308 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NPRL2Q8WTW4 380 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 MRPL24Q96A35 216 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ESAMQ96AP7 390 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms