RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 FGF21Q9NSA1 209 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 ABCB8Q9NUT2 735 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.96□□□□□ -1.78
LIG3-211ENST00000588713 OCIAD1Q9NX40 245 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 SCN3BQ9NY72 215 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 STMN3Q9NZ72 180 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 OPTCQ9UBM4 332 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 TNFRSF10DQ9UBN6 386 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 KLQ9UEF7 1012 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 ST6GALNAC2Q9UJ37 374 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 MKLN1Q9UL63 735 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 TRAPPC4Q9Y296 219 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 DNAJC15Q9Y5T4 150 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 PEX16Q9Y5Y5 336 aa3.96□□□□□ -1.78
LIG3-211ENST00000588713 MAP1AP78559 2803 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SPTY2D1-AS1A0A0U1RR47 76 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 LOC105371267A0A1B0GV96 52 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 A0A1W2PQU0 124 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 TLCD2A6NGC4 264 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CENPXA8MT69 81 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PDZK1P1A8MUH7 402 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 STX16O14662 325 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 GABRDO14764 452 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 STX7O15400 261 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 FGF10O15520 208 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 SLC7A4O43246 635 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ZW10O43264 779 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PLRG1O43660 514 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 HS6ST1O60243 411 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ICMTO60725 284 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SNX2O60749 519 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 HUS1O60921 280 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 KERAO60938 352 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 FAM20BO75063 409 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CRLF1O75462 422 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CRCPO75575 148 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CREG1O75629 220 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SLC22A3O75751 556 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 RECQL5O94762 991 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 CDK14O94921 469 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SCELO95171 688 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 MLYCDO95822 493 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 FADS2O95864 444 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 CST1P01037 141 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 MT-ND2P03891 347 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 HMBSP08397 361 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 F7P08709 466 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 PCNAP12004 261 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 EDN3P14138 238 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 NCK1P16333 377 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ITGA2P17301 1181 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 OGNP20774 298 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 AGXTP21549 392 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 FDXRP22570 491 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 IGFBP5P24593 272 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PSMB9P28065 219 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 MZF1P28698 734 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 HLA-FP30511 346 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ADRA1AP35348 466 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 DRD3P35462 400 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 MAGEA2P43356 314 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 HTR3AP46098 478 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ZFP36L2P47974 494 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 PPM1FP49593 454 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 POLR2JP52435 117 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 AP2S1P53680 142 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 CDH13P55290 713 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 P2RX3P56373 397 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 OR2B6P58173 313 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 OR4D2P58180 307 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 VBP1P61758 197 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 NCS1P62166 190 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 IL5RAQ01344 420 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 EMX1Q04741 257 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 RAD51Q06609 339 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 HSPA14Q0VDF9 509 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SLC13A2Q13183 592 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PRKG2Q13237 762 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CDK5R2Q13319 367 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 OLIG2Q13516 323 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 GPR50Q13585 617 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PWP1Q13610 501 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ARHGEF7Q14155 803 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 RPS6KA2Q15349 733 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 CDSNQ15517 529 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 MEP1AQ16819 746 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SMU1Q2TAY7 513 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 ZIK1Q3SY52 487 aaPredicted RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 TIMM50Q3ZCQ8 353 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 SV2CQ496J9 727 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 VPS26BQ4G0F5 336 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 RABL3Q5HYI8 236 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 PAGE2BQ5JRK9 111 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 RBM20Q5T481 1227 aaKnown RBP3.95□□□□□ -1.78
LIG3-211ENST00000588713 HECTD2Q5U5R9 776 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 TIGD3Q6B0B8 471 aa3.95□□□□□ -1.78
LIG3-211ENST00000588713 FAAH2Q6GMR7 532 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms