RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CYB5D1Q6P9G0 228 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 PGM2L1Q6PCE3 622 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZNF621Q6ZSS3 439 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 RAB11FIP2Q7L804 512 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZC3H7AQ8IWR0 971 aaKnown RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 ULK2Q8IYT8 1036 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 NATD1Q8N6N6 113 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 RNF148Q8N7C7 305 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 OR4K14Q8NGD5 310 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 DNAJB8Q8NHS0 232 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 NETO1Q8TDF5 533 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ADAMTS18Q8TE60 1221 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TANKQ92844 425 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 MCUR1Q96AQ8 359 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TBC1D20Q96BZ9 403 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZBED6CLQ96FA7 236 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 LIN37Q96GY3 246 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 DEPDC7Q96QD5 511 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 BBS4Q96RK4 519 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 YIPF2Q9BWQ6 316 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CXorf36Q9H7Y0 433 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 SPAG4Q9NPE6 437 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 PRTFDC1Q9NRG1 225 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 SIRT3Q9NTG7 399 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 ACSS1Q9NUB1 689 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 GIMAP4Q9NUV9 329 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 SLC39A1Q9NY26 324 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TAS2R9Q9NYW1 312 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ADA2Q9NZK5 511 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 AKAP7Q9P0M2 348 aaPredicted RBP10.63□□□□□ -0.71
VMP1-207ENST00000588131 ABCD2Q9UBJ2 740 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 TRPC4Q9UBN4 977 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ACSL6Q9UKU0 697 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 VPS4AQ9UN37 437 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 MAP4K5Q9Y4K4 846 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 CLDN16Q9Y5I7 305 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 ZNF780BQ9Y6R6 833 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
VMP1-207ENST00000588131 FER1L5A0AVI2 2057 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 PRORSD1PA6NEY8 169 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 NVLO15381 856 aaKnown RBP10.62□□□□□ -0.71
VMP1-207ENST00000588131 GPR75O95800 540 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 CPMP14384 443 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 RORAP35398 523 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 SOAT1P35610 550 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 XKP51811 444 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 EFNA3P52797 238 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 MAPK10P53779 464 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 LTB4RQ15722 352 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 VWA2Q5GFL6 755 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 PIGGQ5H8A4 983 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 LCN10Q6JVE6 187 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 HPS6Q86YV9 775 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 TMEM151BQ8IW70 566 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 SCUBE1Q8IWY4 988 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 ZNF595Q8IYB9 648 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 C10orf111Q8N326 155 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 FAM156AQ8NDB6 213 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 OR8J3Q8NGG0 315 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 OR9A2Q8NGT5 310 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 OR5AK3PQ8NH89 298 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 ZFP90Q8TF47 636 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 RAB3IPQ96QF0 476 aaPredicted RBP10.62□□□□□ -0.71
VMP1-207ENST00000588131 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
VMP1-207ENST00000588131 LANCL2Q9NS86 450 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 ZNF282Q9UDV7 671 aaPredicted RBP10.62□□□□□ -0.71
VMP1-207ENST00000588131 PISDQ9UG56 409 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 PSME2Q9UL46 239 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 PCDHGB4Q9UN71 923 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 USP22Q9UPT9 525 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 RRP15Q9Y3B9 282 aaKnown RBP10.62□□□□□ -0.71
VMP1-207ENST00000588131 SCN2AQ99250 2005 aa10.62□□□□□ -0.71
VMP1-207ENST00000588131 CCDC187A0A096LP49 1063 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 C15orf38-AP3S2A0A0A6YYH1 394 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 RNF103-CHMP3A0A140T963 221 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 BLACEA4D250 179 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CLIC1O00299 241 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 GFRA3O60609 400 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CTNSO60931 367 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CPNE3O75131 537 aaKnown RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 HBQ1P09105 142 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CDK4P11802 303 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MAOAP21397 527 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 GPC1P35052 558 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MSX2P35548 267 aaPredicted RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 SOX18P35713 384 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 FOXL2P58012 376 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 SLC13A2Q13183 592 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 NKAIN1Q4KMZ8 207 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CEACAM20Q6UY09 585 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 DGAT2L6Q6ZPD8 337 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MED25Q71SY5 747 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 GPR155Q7Z3F1 870 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 ARPINQ7Z6K5 226 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MARCH9Q86YJ5 346 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 LRRC25Q8N386 305 aaPredicted RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 FBXW8Q8N3Y1 598 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 ZFP28Q8NHY6 868 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms